RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 EP400Q96L91 3159 aa8.83□□□□□ -1
LSM5-208ENST00000450169 ARFGEF1Q9Y6D6 1849 aa8.83□□□□□ -1
LSM5-208ENST00000450169 ZNFX1Q9P2E3 1918 aaKnown RBP8.83□□□□□ -1
LSM5-208ENST00000450169 MSI1O43347 362 aaKnown RBP8.83□□□□□ -1
LSM5-208ENST00000450169 JRKO75564 520 aa8.83□□□□□ -1
LSM5-208ENST00000450169 GCATO75600 419 aa8.83□□□□□ -1
LSM5-208ENST00000450169 RFPL1O75677 317 aa8.83□□□□□ -1
LSM5-208ENST00000450169 BCAS2O75934 225 aaPredicted RBP8.83□□□□□ -1
LSM5-208ENST00000450169 TMEM63AO94886 807 aa8.83□□□□□ -1
LSM5-208ENST00000450169 F12P00748 615 aaPredicted RBP8.83□□□□□ -1
LSM5-208ENST00000450169 SERPINB2P05120 415 aa8.83□□□□□ -1
LSM5-208ENST00000450169 FGFR3P22607 806 aa8.83□□□□□ -1
LSM5-208ENST00000450169 HSPA1LP34931 641 aa8.83□□□□□ -1
LSM5-208ENST00000450169 ELK3P41970 407 aa8.83□□□□□ -1
LSM5-208ENST00000450169 ACADSBP45954 432 aa8.83□□□□□ -1
LSM5-208ENST00000450169 SLC1A6P48664 564 aa8.83□□□□□ -1
LSM5-208ENST00000450169 VAMP7P51809 220 aa8.83□□□□□ -1
LSM5-208ENST00000450169 PKNOX1P55347 436 aa8.83□□□□□ -1
LSM5-208ENST00000450169 KCNQ4P56696 695 aa8.83□□□□□ -1
LSM5-208ENST00000450169 SPIRE1Q08AE8 756 aa8.83□□□□□ -1
LSM5-208ENST00000450169 KLF10Q13118 480 aa8.83□□□□□ -1
LSM5-208ENST00000450169 TEDDM1Q5T9Z0 273 aa8.83□□□□□ -1
LSM5-208ENST00000450169 LGSNQ5TDP6 509 aa8.83□□□□□ -1
LSM5-208ENST00000450169 VWA5B1Q5TIE3 1220 aa8.83□□□□□ -1
LSM5-208ENST00000450169 FAM20CQ8IXL6 584 aa8.83□□□□□ -1
LSM5-208ENST00000450169 KIAA2013Q8IYS2 634 aa8.83□□□□□ -1
LSM5-208ENST00000450169 RCOR2Q8IZ40 523 aa8.83□□□□□ -1
LSM5-208ENST00000450169 TAB3Q8N5C8 712 aaPredicted RBP8.83□□□□□ -1
LSM5-208ENST00000450169 KYQ8NBH2 561 aa8.83□□□□□ -1
LSM5-208ENST00000450169 SLC43A3Q8NBI5 491 aa8.83□□□□□ -1
LSM5-208ENST00000450169 GOLM1Q8NBJ4 401 aa8.83□□□□□ -1
LSM5-208ENST00000450169 PDPRQ8NCN5 879 aa8.83□□□□□ -1
LSM5-208ENST00000450169 APBB2Q92870 758 aa8.83□□□□□ -1
LSM5-208ENST00000450169 DCPSQ96C86 337 aaKnown RBP8.83□□□□□ -1
LSM5-208ENST00000450169 SLITRK1Q96PX8 696 aa8.83□□□□□ -1
LSM5-208ENST00000450169 TP63Q9H3D4 680 aaPredicted RBP8.83□□□□□ -1
LSM5-208ENST00000450169 POLR1BQ9H9Y6 1135 aa8.83□□□□□ -1
LSM5-208ENST00000450169 PCDH12Q9NPG4 1184 aa8.83□□□□□ -1
LSM5-208ENST00000450169 XPO7Q9UIA9 1087 aaKnown RBP8.83□□□□□ -1
LSM5-208ENST00000450169 ZNF652Q9Y2D9 606 aa8.83□□□□□ -1
LSM5-208ENST00000450169 ST14Q9Y5Y6 855 aa8.83□□□□□ -1
LSM5-208ENST00000450169 UBE4BO95155 1302 aa8.82□□□□□ -1
LSM5-208ENST00000450169 FRMPD2Q68DX3 1309 aaPredicted RBP8.82□□□□□ -1
LSM5-208ENST00000450169 TCRBV7S3A2A0A539 114 aa8.82□□□□□ -1
LSM5-208ENST00000450169 ILVBLA1L0T0 632 aa8.82□□□□□ -1
LSM5-208ENST00000450169 H0YIN7 160 aa8.82□□□□□ -1
LSM5-208ENST00000450169 ZBTB14O43829 449 aa8.82□□□□□ -1
LSM5-208ENST00000450169 CSPG5O95196 566 aa8.82□□□□□ -1
LSM5-208ENST00000450169 P4HBP07237 508 aaKnown RBP8.82□□□□□ -1
LSM5-208ENST00000450169 GRM5P41594 1212 aa8.82□□□□□ -1
LSM5-208ENST00000450169 CEACAM7Q14002 265 aa8.82□□□□□ -1
LSM5-208ENST00000450169 ZNF846Q147U1 533 aa8.82□□□□□ -1
LSM5-208ENST00000450169 SPCS2Q15005 226 aa8.82□□□□□ -1
LSM5-208ENST00000450169 FASTKD1Q53R41 847 aaKnown RBP8.82□□□□□ -1
LSM5-208ENST00000450169 C2CD6Q53TS8 623 aa8.82□□□□□ -1
LSM5-208ENST00000450169 BTBD8Q5XKL5 378 aa8.82□□□□□ -1
LSM5-208ENST00000450169 MBLAC2Q68D91 279 aa8.82□□□□□ -1
LSM5-208ENST00000450169 DESI1Q6ICB0 168 aa8.82□□□□□ -1
LSM5-208ENST00000450169 PPP1R18Q6NYC8 613 aa8.82□□□□□ -1
LSM5-208ENST00000450169 MFSD7Q6UXD7 560 aa8.82□□□□□ -1
LSM5-208ENST00000450169 C4orf22Q6V702 233 aa8.82□□□□□ -1
LSM5-208ENST00000450169 STXBP4Q6ZWJ1 553 aa8.82□□□□□ -1
LSM5-208ENST00000450169 TAS2R42Q7RTR8 314 aa8.82□□□□□ -1
LSM5-208ENST00000450169 BTLAQ7Z6A9 289 aa8.82□□□□□ -1
LSM5-208ENST00000450169 ANKRD13BQ86YJ7 626 aa8.82□□□□□ -1
LSM5-208ENST00000450169 DSELQ8IZU8 1212 aa8.82□□□□□ -1
LSM5-208ENST00000450169 NDUFAF2Q8N183 169 aa8.82□□□□□ -1
LSM5-208ENST00000450169 RNF148Q8N7C7 305 aa8.82□□□□□ -1
LSM5-208ENST00000450169 PPM1NQ8N819 430 aa8.82□□□□□ -1
LSM5-208ENST00000450169 ZNF486Q96H40 463 aaPredicted RBP8.82□□□□□ -1
LSM5-208ENST00000450169 EGLN2Q96KS0 407 aa8.82□□□□□ -1
LSM5-208ENST00000450169 SLC4A5Q9BY07 1137 aa8.82□□□□□ -1
LSM5-208ENST00000450169 HOXD1Q9GZZ0 328 aa8.82□□□□□ -1
LSM5-208ENST00000450169 SNX25Q9H3E2 840 aa8.82□□□□□ -1
LSM5-208ENST00000450169 RMND5AQ9H871 391 aa8.82□□□□□ -1
LSM5-208ENST00000450169 NANOGQ9H9S0 305 aa8.82□□□□□ -1
LSM5-208ENST00000450169 HOMER2Q9NSB8 354 aa8.82□□□□□ -1
LSM5-208ENST00000450169 TBC1D14Q9P2M4 693 aa8.82□□□□□ -1
LSM5-208ENST00000450169 TRIM64A6NGJ6 449 aa8.82□□□□□ -1
LSM5-208ENST00000450169 CLDN25C9JDP6 229 aa8.82□□□□□ -1
LSM5-208ENST00000450169 UFL1O94874 794 aa8.82□□□□□ -1
LSM5-208ENST00000450169 CRYZL1O95825 349 aa8.82□□□□□ -1
LSM5-208ENST00000450169 KRT1P04264 644 aa8.82□□□□□ -1
LSM5-208ENST00000450169 UNGP13051 313 aaPredicted RBP8.82□□□□□ -1
LSM5-208ENST00000450169 PRKACBP22694 351 aa8.82□□□□□ -1
LSM5-208ENST00000450169 ME2P23368 584 aa8.82□□□□□ -1
LSM5-208ENST00000450169 CTHP32929 405 aa8.82□□□□□ -1
LSM5-208ENST00000450169 CRHR1P34998 444 aa8.82□□□□□ -1
LSM5-208ENST00000450169 KRT6CP48668 564 aa8.82□□□□□ -1
LSM5-208ENST00000450169 NKX2-5P52952 324 aaPredicted RBP8.82□□□□□ -1
LSM5-208ENST00000450169 AP3M2P53677 418 aa8.82□□□□□ -1
LSM5-208ENST00000450169 MLLT10P55197 1068 aa8.82□□□□□ -1
LSM5-208ENST00000450169 TSPY1Q01534 308 aa8.82□□□□□ -1
LSM5-208ENST00000450169 BMPR2Q13873 1038 aa8.82□□□□□ -1
LSM5-208ENST00000450169 GRIK5Q16478 980 aa8.82□□□□□ -1
LSM5-208ENST00000450169 PGS1Q32NB8 556 aa8.82□□□□□ -1
LSM5-208ENST00000450169 CCDC58Q4VC31 144 aa8.82□□□□□ -1
LSM5-208ENST00000450169 ATP13A4Q4VNC1 1196 aa8.82□□□□□ -1
LSM5-208ENST00000450169 PPP6R3Q5H9R7 873 aaPredicted RBP8.82□□□□□ -1
LSM5-208ENST00000450169 NHSL2Q5HYW2 709 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms