RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 MAP2K3P46734 347 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 GALCP54803 685 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 POLE2P56282 527 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 RPS14P62263 151 aaKnown RBP8.28□□□□□ -1.08
LINC01961-201ENST00000449954 CYP27A1Q02318 531 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 EIF3IQ13347 325 aaKnown RBP8.28□□□□□ -1.08
LINC01961-201ENST00000449954 MANEAQ5SRI9 462 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 ZNF776Q68DI1 518 aaPredicted RBP8.28□□□□□ -1.08
LINC01961-201ENST00000449954 NCEH1Q6PIU2 408 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 DPH6Q7L8W6 267 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 TMC6Q7Z403 805 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 OSTM1Q86WC4 334 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 SRRM1Q8IYB3 904 aaKnown RBP8.28□□□□□ -1.08
LINC01961-201ENST00000449954 MFSD2AQ8NA29 543 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 OR2T34Q8NGX1 318 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 BHMTQ93088 406 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 CIPCQ9C0C6 399 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 ELOVL4Q9GZR5 314 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 CCSER2Q9H7U1 834 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 ZNF358Q9NW07 568 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 NCKIPSDQ9NZQ3 722 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 USP3Q9Y6I4 520 aa8.28□□□□□ -1.08
LINC01961-201ENST00000449954 CSMD2Q7Z408 3487 aa8.27□□□□□ -1.08
LINC01961-201ENST00000449954 MED13Q9UHV7 2174 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 A1L4Q6 167 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 CDKL5O76039 1030 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 CPA1P15085 419 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 POLR2BP30876 1174 aaKnown RBP8.27□□□□□ -1.09
LINC01961-201ENST00000449954 PSMC1P62191 440 aaKnown RBP8.27□□□□□ -1.09
LINC01961-201ENST00000449954 PDE4CQ08493 712 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 IFRD2Q12894 506 aaPredicted RBP8.27□□□□□ -1.09
LINC01961-201ENST00000449954 NAPEPLDQ6IQ20 393 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 SPATS2Q86XZ4 545 aaKnown RBP8.27□□□□□ -1.09
LINC01961-201ENST00000449954 NUP93Q8N1F7 819 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 SLC25A45Q8N413 288 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 TMEM151AQ8N4L1 468 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 RBBP8NLQ8NC74 664 aaPredicted RBP8.27□□□□□ -1.09
LINC01961-201ENST00000449954 WDR48Q8TAF3 677 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 C9orf43Q8TAL5 461 aaPredicted RBP8.27□□□□□ -1.09
LINC01961-201ENST00000449954 MYCBPAPQ8TBZ2 947 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 IFI44Q8TCB0 444 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 HTR3CQ8WXA8 447 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 TNFRSF25Q93038 417 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 WBP2Q969T9 261 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 SCARF2Q96GP6 870 aaPredicted RBP8.27□□□□□ -1.09
LINC01961-201ENST00000449954 ABHD17AQ96GS6 310 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 PCED1BQ96HM7 432 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 UCN2Q96RP3 112 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 DUSP23Q9BVJ7 150 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 RUSC1Q9BVN2 902 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 ZCCHC2Q9C0B9 1178 aaKnown RBP8.27□□□□□ -1.09
LINC01961-201ENST00000449954 OSBPL2Q9H1P3 480 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 TMEM60Q9H2L4 133 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 TMEM245Q9H330 911 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 EBF2Q9HAK2 575 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 DDX19AQ9NUU7 478 aaKnown RBP8.27□□□□□ -1.09
LINC01961-201ENST00000449954 PLK2Q9NYY3 685 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 NLGN3Q9NZ94 848 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 LARSQ9P2J5 1176 aaKnown RBP8.27□□□□□ -1.09
LINC01961-201ENST00000449954 FZD4Q9ULV1 537 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 KIAA1024Q9UPX6 916 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 DNM3Q9UQ16 869 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 SNX9Q9Y5X1 595 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 HIVEP1P15822 2718 aa8.27□□□□□ -1.09
LINC01961-201ENST00000449954 C10orf142B7Z368 130 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 PLD2O14939 933 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 ATP9BO43861 1147 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 BNIP3LO60238 219 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 TLR5O60602 858 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 ATP2C2O75185 946 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 RTN2O75298 545 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 VPS4BO75351 444 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 IL18RAPO95256 599 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 ZDHHC11BP0C7U3 371 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 TGM2P21980 687 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 RPS6KB1P23443 525 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 DGKAP23743 735 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 SLC5A2P31639 672 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 ABCD1P33897 745 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 NUDT1P36639 197 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 ATP1A2P50993 1020 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 NCKAP1LP55160 1127 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 KCNJ12Q14500 433 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 TGIF1Q15583 401 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 ECM1Q16610 540 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 FNDC3BQ53EP0 1204 aaKnown RBP8.26□□□□□ -1.09
LINC01961-201ENST00000449954 FYB2Q5VWT5 728 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 CAPRIN2Q6IMN6 1127 aaKnown RBP8.26□□□□□ -1.09
LINC01961-201ENST00000449954 RINT1Q6NUQ1 792 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 FIGNL1Q6PIW4 674 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 C1orf186Q6ZWK4 172 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 GANCQ8TET4 914 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 PIWIL1Q96J94 861 aaKnown RBP8.26□□□□□ -1.09
LINC01961-201ENST00000449954 APOLD1Q96LR9 279 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 JAKMIP1Q96N16 626 aaKnown RBP8.26□□□□□ -1.09
LINC01961-201ENST00000449954 SLC2A11Q9BYW1 496 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 PABPC3Q9H361 631 aaKnown RBP8.26□□□□□ -1.09
LINC01961-201ENST00000449954 CRTAC1Q9NQ79 661 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 FBXL12Q9NXK8 326 aa8.26□□□□□ -1.09
LINC01961-201ENST00000449954 ITGA11Q9UKX5 1188 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms