RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 RABGAP1LQ5R372 815 aa15.08■□□□□ 0
TNF-208ENST00000449264 ACBD5Q5T8D3 534 aaPredicted RBP15.08■□□□□ 0
TNF-208ENST00000449264 NCBP2-AS2Q69YL0 99 aa15.08■□□□□ 0
TNF-208ENST00000449264 SLC9A4Q6AI14 798 aa15.08■□□□□ 0
TNF-208ENST00000449264 TMCO3Q6UWJ1 677 aa15.08■□□□□ 0
TNF-208ENST00000449264 NPNTQ6UXI9 565 aa15.08■□□□□ 0
TNF-208ENST00000449264 ZNF683Q8IZ20 524 aa15.08■□□□□ 0
TNF-208ENST00000449264 ZDHHC14Q8IZN3 488 aa15.08■□□□□ 0
TNF-208ENST00000449264 CFAP52Q8N1V2 620 aa15.08■□□□□ 0
TNF-208ENST00000449264 PLD5Q8N7P1 536 aa15.08■□□□□ 0
TNF-208ENST00000449264 NETO2Q8NC67 525 aa15.08■□□□□ 0
TNF-208ENST00000449264 MAIP1Q8WWC4 291 aa15.08■□□□□ 0
TNF-208ENST00000449264 ATG4AQ8WYN0 398 aa15.08■□□□□ 0
TNF-208ENST00000449264 BHMTQ93088 406 aa15.08■□□□□ 0
TNF-208ENST00000449264 RSPRY1Q96DX4 576 aa15.08■□□□□ 0
TNF-208ENST00000449264 ZYG11BQ9C0D3 744 aa15.08■□□□□ 0
TNF-208ENST00000449264 CATSPERBQ9H7T0 1116 aa15.08■□□□□ 0
TNF-208ENST00000449264 EFR3BQ9Y2G0 817 aa15.08■□□□□ 0
TNF-208ENST00000449264 R3HDM2Q9Y2K5 976 aaKnown RBP15.08■□□□□ 0
TNF-208ENST00000449264 NR2E1Q9Y466 385 aa15.08■□□□□ 0
TNF-208ENST00000449264 HEY1Q9Y5J3 304 aa15.08■□□□□ 0
TNF-208ENST00000449264 NUP205Q92621 2012 aa15.08■□□□□ 0
TNF-208ENST00000449264 GRXCR2A6NFK2 248 aa15.07■□□□□ 0
TNF-208ENST00000449264 APOC4-APOC2K7ER74 178 aa15.07■□□□□ 0
TNF-208ENST00000449264 DCLK1O15075 740 aa15.07■□□□□ 0
TNF-208ENST00000449264 FGF10O15520 208 aaPredicted RBP15.07■□□□□ 0
TNF-208ENST00000449264 MFSD11O43934 449 aa15.07■□□□□ 0
TNF-208ENST00000449264 CNTN5O94779 1100 aa15.07■□□□□ 0
TNF-208ENST00000449264 APOC2P02655 101 aa15.07■□□□□ 0
TNF-208ENST00000449264 HOXC13P31276 330 aa15.07■□□□□ 0
TNF-208ENST00000449264 HTR7P34969 479 aa15.07■□□□□ 0
TNF-208ENST00000449264 HCAR3P49019 387 aa15.07■□□□□ 0
TNF-208ENST00000449264 RPS24P62847 133 aaKnown RBP15.07■□□□□ 0
TNF-208ENST00000449264 SIX1Q15475 284 aaPredicted RBP15.07■□□□□ 0
TNF-208ENST00000449264 ALFQ53S48 1182 aa15.07■□□□□ 0
TNF-208ENST00000449264 CCDC33Q8N5R6 958 aa15.07■□□□□ 0
TNF-208ENST00000449264 CEP112Q8N8E3 955 aa15.07■□□□□ 0
TNF-208ENST00000449264 MNS1Q8NEH6 495 aa15.07■□□□□ 0
TNF-208ENST00000449264 C1orf54Q8WWF1 131 aa15.07■□□□□ 0
TNF-208ENST00000449264 SUSD6Q92537 303 aa15.07■□□□□ 0
TNF-208ENST00000449264 RBM12Q9NTZ6 932 aaKnown RBP15.07■□□□□ 0
TNF-208ENST00000449264 STOML2Q9UJZ1 356 aa15.07■□□□□ 0
TNF-208ENST00000449264 WNT6Q9Y6F9 365 aa15.07■□□□□ 0
TNF-208ENST00000449264 ZFP37Q9Y6Q3 630 aaPredicted RBP15.07■□□□□ 0
TNF-208ENST00000449264 IGLV3-10A0A075B6K4 115 aa15.06■□□□□ 0
TNF-208ENST00000449264 TYW5A2RUC4 315 aaKnown RBP15.06■□□□□ 0
TNF-208ENST00000449264 CTAGE15A4D2H0 777 aa15.06■□□□□ 0
TNF-208ENST00000449264 HEPACAM2A8MVW5 462 aa15.06■□□□□ 0
TNF-208ENST00000449264 CTAGE8P0CG41 777 aa15.06■□□□□ 0
TNF-208ENST00000449264 ZFXP17010 805 aaPredicted RBP15.06■□□□□ 0
TNF-208ENST00000449264 TGM2P21980 687 aa15.06■□□□□ 0
TNF-208ENST00000449264 WEE1P30291 646 aa15.06■□□□□ 0
TNF-208ENST00000449264 OTUD4Q01804 1114 aaKnown RBP15.06■□□□□ 0
TNF-208ENST00000449264 GBE1Q04446 702 aa15.06■□□□□ 0
TNF-208ENST00000449264 SMAD4Q13485 552 aaKnown RBP15.06■□□□□ 0
TNF-208ENST00000449264 ARTNQ5T4W7 220 aa15.06■□□□□ 0
TNF-208ENST00000449264 TPGS1Q6ZTW0 290 aa15.06■□□□□ 0
TNF-208ENST00000449264 CTAGE6Q86UF2 777 aa15.06■□□□□ 0
TNF-208ENST00000449264 CTAGE4Q8IX94 777 aa15.06■□□□□ 0
TNF-208ENST00000449264 NPWQ8N729 165 aa15.06■□□□□ 0
TNF-208ENST00000449264 TDRD5Q8NAT2 981 aaKnown RBP15.06■□□□□ 0
TNF-208ENST00000449264 LRRN4CLQ8ND94 238 aa15.06■□□□□ 0
TNF-208ENST00000449264 SPATA4Q8NEY3 305 aa15.06■□□□□ 0
TNF-208ENST00000449264 ACTL9Q8TC94 416 aa15.06■□□□□ 0
TNF-208ENST00000449264 HLA-CQ95604 372 aa15.06■□□□□ 0
TNF-208ENST00000449264 LRRC3BQ96PB8 259 aa15.06■□□□□ 0
TNF-208ENST00000449264 PPARGC1AQ9UBK2 798 aaKnown RBP15.06■□□□□ 0
TNF-208ENST00000449264 SHROOM3Q8TF72 1996 aa15.06■□□□□ 0
TNF-208ENST00000449264 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.06■□□□□ 0
TNF-208ENST00000449264 RIOK3O14730 519 aaKnown RBP15.06■□□□□ 0
TNF-208ENST00000449264 TBL1XO60907 577 aa15.06■□□□□ 0
TNF-208ENST00000449264 LAMP2P13473 410 aa15.06■□□□□ 0
TNF-208ENST00000449264 TCF3P15923 654 aa15.06■□□□□ 0
TNF-208ENST00000449264 FCARP24071 287 aa15.06■□□□□ 0
TNF-208ENST00000449264 CHKAP35790 457 aa15.06■□□□□ 0
TNF-208ENST00000449264 SNX1Q13596 522 aa15.06■□□□□ 0
TNF-208ENST00000449264 TANGO2Q6ICL3 276 aa15.06■□□□□ 0
TNF-208ENST00000449264 KLHL7Q8IXQ5 586 aa15.06■□□□□ 0
TNF-208ENST00000449264 FAM217AQ8IXS0 508 aa15.06■□□□□ 0
TNF-208ENST00000449264 RTL3Q8N8U3 475 aaKnown RBP15.06■□□□□ 0
TNF-208ENST00000449264 PRELID2Q8N945 189 aa15.06■□□□□ 0
TNF-208ENST00000449264 HJURPQ8NCD3 748 aaPredicted RBP15.06■□□□□ 0
TNF-208ENST00000449264 BPIFB1Q8TDL5 484 aa15.06■□□□□ 0
TNF-208ENST00000449264 P3H4Q92791 437 aa15.06■□□□□ 0
TNF-208ENST00000449264 CELF6Q96J87 481 aaKnown RBP15.06■□□□□ 0
TNF-208ENST00000449264 KXD1Q9BQD3 176 aa15.06■□□□□ 0
TNF-208ENST00000449264 ZFP14Q9HCL3 533 aa15.06■□□□□ 0
TNF-208ENST00000449264 NDFIP2Q9NV92 336 aa15.06■□□□□ 0
TNF-208ENST00000449264 KIF26AQ9ULI4 1882 aaPredicted RBP15.05■□□□□ 0
TNF-208ENST00000449264 DRGXA6NNA5 263 aa15.05■□□□□ -0
TNF-208ENST00000449264 MBTPS2O43462 519 aa15.05■□□□□ -0
TNF-208ENST00000449264 RHOQP17081 205 aa15.05■□□□□ -0
TNF-208ENST00000449264 SERPINB6P35237 376 aa15.05■□□□□ -0
TNF-208ENST00000449264 ZNF572Q7Z3I7 529 aaPredicted RBP15.05■□□□□ -0
TNF-208ENST00000449264 NLRP14Q86W24 1093 aa15.05■□□□□ -0
TNF-208ENST00000449264 CPXM2Q8N436 756 aa15.05■□□□□ -0
TNF-208ENST00000449264 DDI1Q8WTU0 396 aa15.05■□□□□ -0
TNF-208ENST00000449264 DDX47Q9H0S4 455 aaKnown RBP15.05■□□□□ -0
TNF-208ENST00000449264 LINC00597Q9H2U6 94 aa15.05■□□□□ -0
TNF-208ENST00000449264 TRPV4Q9HBA0 871 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms