RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 BCCIPQ9P287 314 aaKnown RBP eCLIP14.55□□□□□ -0.08
RTFDC1-204ENST00000449062 SLC12A6Q9UHW9 1150 aa14.55□□□□□ -0.08
RTFDC1-204ENST00000449062 USP18Q9UMW8 372 aa14.55□□□□□ -0.08
RTFDC1-204ENST00000449062 HS3ST4Q9Y661 456 aa14.55□□□□□ -0.08
RTFDC1-204ENST00000449062 SYNJ2BP-COX16A0A087WUM0 186 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 A0A1W2PQC6 194 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 TCRBV5S1A1TA0A578 114 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 SYCE3A1L190 88 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 DRGXA6NNA5 263 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 GDF9O60383 454 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 PAGE1O75459 146 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 LUC7L3O95232 432 aaKnown RBP14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 F9P00740 461 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 HLA-EP13747 358 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 ABCB4P21439 1286 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 MPLP40238 635 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 PTGER3P43115 390 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 IRAK1P51617 712 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 CENPCQ03188 943 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 LMNB2Q03252 620 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 NME3Q13232 169 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 MTA1Q13330 715 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 ARID5BQ14865 1188 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 SF3A2Q15428 464 aaKnown RBP14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 CCDC6Q16204 474 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 RSPO4Q2I0M5 234 aaPredicted RBP14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 CLEC16AQ2KHT3 1053 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 FAM102AQ5T9C2 384 aaPredicted RBP14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 TRIM72Q6ZMU5 477 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 CHSY1Q86X52 802 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 PHF13Q86YI8 300 aaPredicted RBP14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 TMPRSS6Q8IU80 811 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 CARNMT1Q8N4J0 409 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 C1orf74Q96LT6 269 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 AGPAT1Q99943 283 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 SMOC1Q9H4F8 434 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 CBX8Q9HC52 389 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 RXFP3Q9NSD7 469 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 TMEM51Q9NW97 253 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 COX16Q9P0S2 106 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 USP36Q9P275 1121 aaKnown RBP14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 MYO6Q9UM54 1294 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 PLA2G4CQ9UP65 541 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 OR51B4Q9Y5P0 310 aa14.54□□□□□ -0.08
RTFDC1-204ENST00000449062 RALGAPA1Q6GYQ0 2036 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 F5H5T6 163 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 GOLGA8SH3BPF8 625 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 FOXD2O60548 495 aaPredicted RBP14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 ZNF217O75362 1048 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 IGLV3-19P01714 112 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 ATP5BP06576 529 aaKnown RBP14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 EPHX1P07099 455 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 POLR2EP19388 210 aaKnown RBP14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 CSKP41240 450 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 ATXN1P54253 815 aaKnown RBP14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 STARD3Q14849 445 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 PLEKHG6Q3KR16 790 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 RAB6CQ53S08 254 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 PITRM1Q5JRX3 1037 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 BRMS1LQ5PSV4 323 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 CXorf57Q6NSI4 855 aaKnown RBP14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 SERPINA13PQ6UXR4 307 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 TMEFF1Q8IYR6 380 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 APCDD1Q8J025 514 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 CCAR2Q8N163 923 aaKnown RBP14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 KDM1BQ8NB78 822 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 OR52K2Q8NGK3 314 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 CENPIQ92674 756 aaPredicted RBP14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 RNF34Q969K3 372 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 ZNF419Q96HQ0 510 aaPredicted RBP14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 PCMTD1Q96MG8 357 aaPredicted RBP14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 TTYH3Q9C0H2 523 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 RAB6CQ9H0N0 254 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 WDCPQ9H6R7 721 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 PRDM16Q9HAZ2 1276 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 PRSS16Q9NQE7 514 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 TMPRSS4Q9NRS4 437 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 VPS45Q9NRW7 570 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 TMEM74BQ9NUR3 256 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 KIAA1522Q9P206 1035 aaPredicted RBP14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 TPRP12270 2363 aaKnown RBP14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 CKAP5Q14008 2032 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 THADAQ6YHU6 1953 aa14.53□□□□□ -0.08
RTFDC1-204ENST00000449062 CACNA1EQ15878 2313 aa14.52□□□□□ -0.08
RTFDC1-204ENST00000449062 C2CD4BA6NLJ0 364 aa14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 TM4SF5O14894 197 aa14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 MAP3K13O43283 966 aa14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 CAVIN2O95810 425 aa14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 PBX1P40424 430 aa14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 PI4KAP42356 2102 aa14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 CTSOP43234 321 aaPredicted RBP14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 GSCP56915 257 aaPredicted RBP14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 CREB5Q02930 508 aa14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 ARID5AQ03989 594 aa14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 PUM1Q14671 1186 aaKnown RBP eCLIP14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 CCDC14Q49A88 953 aa14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 PEAR1Q5VY43 1037 aaPredicted RBP14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 LPCAT2Q7L5N7 544 aa14.52□□□□□ -0.09
RTFDC1-204ENST00000449062 PHLDB2Q86SQ0 1253 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms