RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 XPNPEP3Q9NQH7 507 aa16.43■□□□□ 0.22
CNOT3-204ENST00000447684 FADS3Q9Y5Q0 445 aa16.43■□□□□ 0.22
CNOT3-204ENST00000447684 CDY2AQ9Y6F7 541 aa16.43■□□□□ 0.22
CNOT3-204ENST00000447684 CDY1Q9Y6F8 540 aa16.43■□□□□ 0.22
CNOT3-204ENST00000447684 FAM159BA6NKW6 160 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 CCDC130P13994 396 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 DPP6P42658 865 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 MTMR1Q13613 665 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 IKBKEQ14164 716 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 NOMO1Q15155 1222 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 PTPN20Q4JDL3 420 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 MTX3Q5HYI7 312 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 TDRD5Q8NAT2 981 aaKnown RBP16.42■□□□□ 0.22
CNOT3-204ENST00000447684 C17orf50Q8WW18 174 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 TFAP2BQ92481 460 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 SLC29A1Q99808 456 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 PCDHAC1Q9H158 963 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 CDH19Q9H159 772 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 USP18Q9UMW8 372 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 TESPA1A2RU30 521 aaPredicted RBP16.42■□□□□ 0.22
CNOT3-204ENST00000447684 MYCLP12524 364 aaPredicted RBP16.42■□□□□ 0.22
CNOT3-204ENST00000447684 TCF7P36402 384 aaPredicted RBP16.42■□□□□ 0.22
CNOT3-204ENST00000447684 ORC1Q13415 861 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 FIBCD1Q8N539 461 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 NIPA2Q8N8Q9 360 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 NPAS2Q99743 824 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 EBNA1BP2Q99848 306 aaKnown RBP16.42■□□□□ 0.22
CNOT3-204ENST00000447684 NEURL2Q9BR09 285 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 OSBPL11Q9BXB4 747 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 FAM198AQ9UFP1 575 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 LRRC37AA6NMS7 1700 aa16.42■□□□□ 0.22
CNOT3-204ENST00000447684 SPDYE2BA6NHP3 402 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 WDR46O15213 610 aaKnown RBP16.41■□□□□ 0.22
CNOT3-204ENST00000447684 SPDYE6P0CI01 402 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 GARTP22102 1010 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 ACADVLP49748 655 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 ITGA7Q13683 1181 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 SPDYE2Q495Y8 402 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 SH3PXD2AQ5TCZ1 1133 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 EGFLAMQ63HQ2 1017 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 NANOGP8Q6NSW7 305 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 DENND1BQ6P3S1 775 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 EPGNQ6UW88 154 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 CYP2R1Q6VVX0 501 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 CMC1Q7Z7K0 106 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 TMEM126BQ8IUX1 230 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 MPHOSPH6Q99547 160 aaKnown RBP16.41■□□□□ 0.22
CNOT3-204ENST00000447684 RSAD1Q9HA92 442 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 TXNDC16Q9P2K2 825 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 AP4S1Q9Y587 144 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 WDR27A2RRH5 827 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 ENTPD3O75355 529 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 CKMT2P17540 419 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 ZNF829Q3KNS6 432 aaPredicted RBP16.41■□□□□ 0.22
CNOT3-204ENST00000447684 TKFCQ3LXA3 575 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 RAB6CQ53S08 254 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 FGD3Q5JSP0 725 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 TTC33Q6PID6 262 aaPredicted RBP16.41■□□□□ 0.22
CNOT3-204ENST00000447684 DPH6Q7L8W6 267 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 RAB6CQ9H0N0 254 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 AGO4Q9HCK5 861 aaKnown RBP16.41■□□□□ 0.22
CNOT3-204ENST00000447684 TRPC7Q9HCX4 862 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 FBXO28Q9NVF7 368 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 GPATCH2LQ9NWQ4 482 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 DCDC2Q9UHG0 476 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
CNOT3-204ENST00000447684 TMED5Q9Y3A6 229 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 PSAT1Q9Y617 370 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 SLX4Q8IY92 1834 aa16.41■□□□□ 0.22
CNOT3-204ENST00000447684 MX2P20592 715 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 CD247P20963 164 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 TXNL4AP83876 142 aaKnown RBP16.4■□□□□ 0.22
CNOT3-204ENST00000447684 NR1D2Q14995 579 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 C6orf183Q5T699 404 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 SCYL2Q6P3W7 929 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 SETD3Q86TU7 594 aaPredicted RBP16.4■□□□□ 0.22
CNOT3-204ENST00000447684 CARM1Q86X55 608 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 PCDH20Q8N6Y1 951 aaKnown RBP16.4■□□□□ 0.22
CNOT3-204ENST00000447684 DLG3Q92796 817 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 ZDHHC15Q96MV8 337 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 NOL11Q9H8H0 719 aaKnown RBP16.4■□□□□ 0.22
CNOT3-204ENST00000447684 CYP26B1Q9NR63 512 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 VPS45Q9NRW7 570 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 CISHQ9NSE2 258 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 PPP1R1BQ9UD71 204 aaPredicted RBP16.4■□□□□ 0.22
CNOT3-204ENST00000447684 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.4■□□□□ 0.22
CNOT3-204ENST00000447684 BCAS2O75934 225 aaPredicted RBP16.4■□□□□ 0.22
CNOT3-204ENST00000447684 LSM8O95777 96 aaKnown RBP16.4■□□□□ 0.22
CNOT3-204ENST00000447684 CST3P01034 146 aaPredicted RBP16.4■□□□□ 0.22
CNOT3-204ENST00000447684 ZNF12P17014 697 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 CLCN2P51788 898 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 SESN2P58004 480 aaPredicted RBP16.4■□□□□ 0.22
CNOT3-204ENST00000447684 ITGADQ13349 1161 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 PTK2BQ14289 1009 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 TRAPPC3LQ5T215 181 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 NAPRTQ6XQN6 538 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 LDHDQ86WU2 507 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 SIGLEC10Q96LC7 697 aa16.4■□□□□ 0.22
CNOT3-204ENST00000447684 HIPK3Q9H422 1215 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms