RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 BTN2A3PQ96KV6 586 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 NAA15Q9BXJ9 866 aaKnown RBP21.48■■□□□ 1.03
SDC1-205ENST00000447124 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.48■■□□□ 1.035e-8■■■□□ 15.1
SDC1-205ENST00000447124 SUN2Q9UH99 717 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 FHOD1Q9Y613 1164 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 ACSL1P33121 698 aa21.47■■□□□ 1.03
SDC1-205ENST00000447124 KRT9P35527 623 aa21.47■■□□□ 1.03
SDC1-205ENST00000447124 SEMA3BQ13214 749 aa21.47■■□□□ 1.03
SDC1-205ENST00000447124 PITRM1Q5JRX3 1037 aa21.47■■□□□ 1.03
SDC1-205ENST00000447124 WDR45BQ5MNZ6 344 aa21.47■■□□□ 1.03
SDC1-205ENST00000447124 DCAF12L1Q5VU92 463 aa21.47■■□□□ 1.03
SDC1-205ENST00000447124 C11orf57Q6ZUT1 292 aaPredicted RBP21.47■■□□□ 1.03
SDC1-205ENST00000447124 RABEPKQ7Z6M1 372 aa21.47■■□□□ 1.03
SDC1-205ENST00000447124 CHSY1Q86X52 802 aa21.47■■□□□ 1.03
SDC1-205ENST00000447124 APCDD1Q8J025 514 aa21.47■■□□□ 1.03
SDC1-205ENST00000447124 ZNF557Q8N988 423 aaPredicted RBP21.47■■□□□ 1.03
SDC1-205ENST00000447124 ADAM33Q9BZ11 813 aa21.47■■□□□ 1.03
SDC1-205ENST00000447124 DACH1Q9UI36 760 aa21.47■■□□□ 1.03
SDC1-205ENST00000447124 PCDH15Q96QU1 1955 aa21.47■■□□□ 1.03
SDC1-205ENST00000447124 SYNJ2BP-COX16A0A087WUM0 186 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 HSF2BPO75031 334 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 CEACAM1P13688 526 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 SLC6A3Q01959 620 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 PLEKHG6Q3KR16 790 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 TCP11X2Q5H9J9 407 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 CT47A1Q5JQC4 288 aaPredicted RBP21.46■■□□□ 1.03
SDC1-205ENST00000447124 PIP4P1Q86T03 277 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 MINDY1Q8N5J2 469 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 ATP6V0D2Q8N8Y2 350 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 C1orf216Q8TAB5 229 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 GPT2Q8TD30 523 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 FAM204AQ9H8W3 233 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 DDIT4Q9NX09 232 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 COX16Q9P0S2 106 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 KIAA1522Q9P206 1035 aaPredicted RBP21.46■■□□□ 1.03
SDC1-205ENST00000447124 SLCO3A1Q9UIG8 710 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 ERVW-1Q9UQF0 538 aa21.46■■□□□ 1.03
SDC1-205ENST00000447124 MUC22E2RYF6 1773 aaPredicted RBP21.46■■□□□ 1.03
SDC1-205ENST00000447124 TYW5A2RUC4 315 aaKnown RBP21.45■■□□□ 1.02
SDC1-205ENST00000447124 H0Y626 953 aa21.45■■□□□ 1.02
SDC1-205ENST00000447124 ATXN3P54252 364 aaPredicted RBP21.45■■□□□ 1.02
SDC1-205ENST00000447124 CDH18Q13634 790 aa21.45■■□□□ 1.02
SDC1-205ENST00000447124 RAPGEF1Q13905 1077 aa21.45■■□□□ 1.02
SDC1-205ENST00000447124 FBXL22Q6P050 247 aa21.45■■□□□ 1.02
SDC1-205ENST00000447124 CIR1Q86X95 450 aaPredicted RBP21.45■■□□□ 1.02
SDC1-205ENST00000447124 ENOX1Q8TC92 643 aaKnown RBP21.45■■□□□ 1.02
SDC1-205ENST00000447124 C6orf106Q9H6K1 298 aaPredicted RBP21.45■■□□□ 1.02
SDC1-205ENST00000447124 TAB2Q9NYJ8 693 aa21.45■■□□□ 1.02
SDC1-205ENST00000447124 SLC12A6Q9UHW9 1150 aa21.45■■□□□ 1.02
SDC1-205ENST00000447124 NFE2L3Q9Y4A8 694 aa21.45■■□□□ 1.02
SDC1-205ENST00000447124 SLCO1B1Q9Y6L6 691 aa21.45■■□□□ 1.02
SDC1-205ENST00000447124 FAM170AA1A519 330 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 MEI4A8MW99 385 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 TTC34A8MYJ7 566 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 UPK3BL1B0FP48 263 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 UPK3BL2E5RIL1 263 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 SIN3BO75182 1162 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 GJB3O75712 270 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 ASLP04424 464 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 CD59P13987 128 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 CYP11B1P15538 503 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 CDH5P33151 784 aaPredicted RBP21.44■■□□□ 1.02
SDC1-205ENST00000447124 NUMBP49757 651 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 BPIFB4P59827 614 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 SHC2P98077 582 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 BNC1Q01954 994 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 HNRNPA1L2Q32P51 320 aaKnown RBP21.44■■□□□ 1.02
SDC1-205ENST00000447124 C9orf64Q5T6V5 341 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 OTUD1Q5VV17 481 aaPredicted RBP21.44■■□□□ 1.02
SDC1-205ENST00000447124 SLC26A9Q7LBE3 791 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 ZNF397Q8NF99 534 aaPredicted RBP21.44■■□□□ 1.02
SDC1-205ENST00000447124 IGSF8Q969P0 613 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 NOX5Q96PH1 765 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 MIR1-1HGQ9H1L0 117 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 RSPH9Q9H1X1 276 aaPredicted RBP21.44■■□□□ 1.02
SDC1-205ENST00000447124 FBRSQ9HAH7 460 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 SUSD2Q9UGT4 822 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 EIF2B4Q9UI10 523 aaKnown RBP21.44■■□□□ 1.02
SDC1-205ENST00000447124 ANGPTL2Q9UKU9 493 aa21.44■■□□□ 1.02
SDC1-205ENST00000447124 MAP1BP46821 2468 aaKnown RBP21.44■■□□□ 1.02
SDC1-205ENST00000447124 A0A1B0GTW7 788 aa21.43■■□□□ 1.02
SDC1-205ENST00000447124 F5H5T6 163 aa21.43■■□□□ 1.02
SDC1-205ENST00000447124 PES1O00541 588 aaKnown RBP21.43■■□□□ 1.02
SDC1-205ENST00000447124 TOP3BO95985 862 aaKnown RBP21.43■■□□□ 1.02
SDC1-205ENST00000447124 SYPP08247 313 aa21.43■■□□□ 1.02
SDC1-205ENST00000447124 SLC2A3P11169 496 aa21.43■■□□□ 1.02
SDC1-205ENST00000447124 UCHL3P15374 230 aa21.43■■□□□ 1.02
SDC1-205ENST00000447124 GNSP15586 552 aa21.43■■□□□ 1.02
SDC1-205ENST00000447124 TFE3P19532 575 aaPredicted RBP21.43■■□□□ 1.02
SDC1-205ENST00000447124 EEF1GP26641 437 aaKnown RBP21.43■■□□□ 1.02
SDC1-205ENST00000447124 MZF1P28698 734 aaPredicted RBP21.43■■□□□ 1.02
SDC1-205ENST00000447124 CCR1P32246 355 aa21.43■■□□□ 1.02
SDC1-205ENST00000447124 NOS2P35228 1153 aa21.43■■□□□ 1.02
SDC1-205ENST00000447124 ANP32AP39687 249 aaKnown RBP21.43■■□□□ 1.02
SDC1-205ENST00000447124 IRAK1P51617 712 aa21.43■■□□□ 1.02
SDC1-205ENST00000447124 ZBTB16Q05516 673 aa21.43■■□□□ 1.02
SDC1-205ENST00000447124 ZNF252P-AS1Q0IIN9 211 aa21.43■■□□□ 1.02
SDC1-205ENST00000447124 RBM43Q6ZSC3 357 aaKnown RBP21.43■■□□□ 1.02
SDC1-205ENST00000447124 C14orf80Q86SX3 495 aa21.43■■□□□ 1.02
SDC1-205ENST00000447124 CCDC117Q8IWD4 279 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms