RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 THP07101 528 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 GM2AP17900 193 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 RGS2P41220 211 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 HCAR3P49019 387 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 TPI1P60174 286 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 WASHC2DQ5SRD0 308 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 BSPRYQ5W0U4 402 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 BHLHA9Q7RTU4 235 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 ARID3BQ8IVW6 561 aaPredicted RBP18.3■□□□□ 0.52
CLDN9-201ENST00000445369 APBA2Q99767 749 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 RNPEPL1Q9HAU8 725 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 MIOSQ9NXC5 875 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 KLHL8Q9P2G9 620 aaPredicted RBP18.3■□□□□ 0.52
CLDN9-201ENST00000445369 FBXW11Q9UKB1 542 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 EMCNQ9ULC0 261 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 ST3GAL5Q9UNP4 418 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 TIMM13Q9Y5L4 95 aaPredicted RBP18.3■□□□□ 0.52
CLDN9-201ENST00000445369 PSAT1Q9Y617 370 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 PTCH2Q9Y6C5 1203 aa18.3■□□□□ 0.52
CLDN9-201ENST00000445369 SHROOM3Q8TF72 1996 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 M0QZ92 97 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 KCNK1O00180 336 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 LTFP02788 710 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 USP17L7P0C7H9 530 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 CALB2P22676 271 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 PPIDQ08752 370 aaKnown RBP18.29■□□□□ 0.52
CLDN9-201ENST00000445369 PDZD4Q76G19 769 aaPredicted RBP18.29■□□□□ 0.52
CLDN9-201ENST00000445369 PID1Q7Z2X4 250 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 RPAINQ86UA6 219 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 ALYREFQ86V81 257 aaKnown RBP18.29■□□□□ 0.52
CLDN9-201ENST00000445369 NPWQ8N729 165 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 BTBD10Q9BSF8 475 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 CADM1Q9BY67 442 aaKnown RBP18.29■□□□□ 0.52
CLDN9-201ENST00000445369 C20orf27Q9GZN8 174 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 NMUR2Q9GZQ4 415 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 ZNF395Q9H8N7 513 aaPredicted RBP18.29■□□□□ 0.52
CLDN9-201ENST00000445369 CDH9Q9ULB4 789 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 HBS1LQ9Y450 684 aaKnown RBP18.29■□□□□ 0.52
CLDN9-201ENST00000445369 PCNTO95613 3336 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 GLRA3O75311 464 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 ITGA2BP08514 1039 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 NCAM1P13591 858 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 PDE1CQ14123 709 aaPredicted RBP18.29■□□□□ 0.52
CLDN9-201ENST00000445369 TAF1CQ15572 869 aaPredicted RBP18.29■□□□□ 0.52
CLDN9-201ENST00000445369 SPANXN3Q5MJ09 141 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 CTU1Q7Z7A3 348 aaKnown RBP18.29■□□□□ 0.52
CLDN9-201ENST00000445369 NSMCE1Q8WV22 266 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 LPPQ93052 612 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 RRN3Q9NYV6 651 aa18.29■□□□□ 0.52
CLDN9-201ENST00000445369 NCAM2O15394 837 aa18.28■□□□□ 0.52
CLDN9-201ENST00000445369 AP2A1O95782 977 aa18.28■□□□□ 0.52
CLDN9-201ENST00000445369 DSTYKQ6XUX3 929 aa18.28■□□□□ 0.52
CLDN9-201ENST00000445369 RASSF3Q86WH2 238 aa18.28■□□□□ 0.52
CLDN9-201ENST00000445369 CRLF3Q8IUI8 442 aa18.28■□□□□ 0.52
CLDN9-201ENST00000445369 SH3TC2Q8TF17 1288 aa18.28■□□□□ 0.52
CLDN9-201ENST00000445369 CERS2Q96G23 380 aa18.28■□□□□ 0.52
CLDN9-201ENST00000445369 SMARCD1Q96GM5 515 aa18.28■□□□□ 0.52
CLDN9-201ENST00000445369 DENND2DQ9H6A0 471 aaPredicted RBP18.28■□□□□ 0.52
CLDN9-201ENST00000445369 YY1AP1Q9H869 796 aa18.28■□□□□ 0.52
CLDN9-201ENST00000445369 DDIT4Q9NX09 232 aa18.28■□□□□ 0.52
CLDN9-201ENST00000445369 NKX1-2Q9UD57 310 aaPredicted RBP18.28■□□□□ 0.52
CLDN9-201ENST00000445369 POLBP06746 335 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 AKR1A1P14550 325 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 CCNG1P51959 295 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 STX3Q13277 289 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 OLIG2Q13516 323 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 FASTKD1Q53R41 847 aaKnown RBP18.27■□□□□ 0.52
CLDN9-201ENST00000445369 INTS6LQ5JSJ4 861 aaKnown RBP18.27■□□□□ 0.52
CLDN9-201ENST00000445369 N4BP2L1Q5TBK1 243 aaPredicted RBP18.27■□□□□ 0.52
CLDN9-201ENST00000445369 MBLAC2Q68D91 279 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 OR52K1Q8NGK4 314 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 HDAC11Q96DB2 347 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 SENP6Q9GZR1 1112 aaPredicted RBP18.27■□□□□ 0.52
CLDN9-201ENST00000445369 WWP1Q9H0M0 922 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 CHST12Q9NRB3 414 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 THAP1Q9NVV9 213 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 ZFATQ9P243 1243 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 RPS6KL1Q9Y6S9 549 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 PATJQ8NI35 1801 aa18.27■□□□□ 0.52
CLDN9-201ENST00000445369 ARL5CA6NH57 179 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 PLIN3O60664 434 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 DIAPH2O60879 1101 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 ARL13BQ3SXY8 428 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 KCTD11Q693B1 232 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 C16orf46Q6P387 395 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 C17orf99Q6UX52 265 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 AGMOQ6ZNB7 445 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 ZCCHC23Q6ZST2 131 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 ENDOVQ8N8Q3 282 aaKnown RBP18.27■□□□□ 0.51
CLDN9-201ENST00000445369 GIMAP7Q8NHV1 300 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 FCRL3Q96P31 734 aaPredicted RBP18.27■□□□□ 0.51
CLDN9-201ENST00000445369 COLEC11Q9BWP8 271 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 BRD8Q9H0E9 1235 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 CSNK1G1Q9HCP0 422 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 IL1RAPL1Q9NZN1 696 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 GIT1Q9Y2X7 761 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 PTPRDP23468 1912 aa18.27■□□□□ 0.51
CLDN9-201ENST00000445369 NUP205Q92621 2012 aa18.26■□□□□ 0.51
CLDN9-201ENST00000445369 CAPN14A8MX76 684 aa18.26■□□□□ 0.51
CLDN9-201ENST00000445369 GSC2O15499 205 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms