RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 LAMTOR5O43504 91 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 ATP5BP06576 529 aaKnown RBP14.54□□□□□ -0.08
SSBP3-208ENST00000444533 POLR2EP19388 210 aaKnown RBP14.54□□□□□ -0.08
SSBP3-208ENST00000444533 HTR7P34969 479 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 ZNF135P52742 658 aaPredicted RBP14.54□□□□□ -0.08
SSBP3-208ENST00000444533 SEC13P55735 322 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 MRPS21P82921 87 aaKnown RBP14.54□□□□□ -0.08
SSBP3-208ENST00000444533 OGDHQ02218 1023 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 SCAPQ12770 1279 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 SLC12A1Q13621 1099 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 IFI16Q16666 785 aaKnown RBP14.54□□□□□ -0.08
SSBP3-208ENST00000444533 GAB4Q2WGN9 574 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 BOLA3Q53S33 107 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 C6orf118Q5T5N4 469 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 CHST9Q7L1S5 443 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 TBC1D31Q96DN5 1066 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 PRICKLE1Q96MT3 831 aaPredicted RBP14.54□□□□□ -0.08
SSBP3-208ENST00000444533 ADAM33Q9BZ11 813 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 CIPCQ9C0C6 399 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 ZYG11BQ9C0D3 744 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 CHRDQ9H2X0 955 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 CATSPERBQ9H7T0 1116 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 ABCB8Q9NUT2 735 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 PPARGC1AQ9UBK2 798 aaKnown RBP14.54□□□□□ -0.08
SSBP3-208ENST00000444533 GGA2Q9UJY4 613 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 FBXO10Q9UK96 956 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 FZD10Q9ULW2 581 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 PLA2G4CQ9UP65 541 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 AP4E1Q9UPM8 1137 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 COL4A2P08572 1712 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 F5P12259 2224 aa14.54□□□□□ -0.08
SSBP3-208ENST00000444533 A0A0A0MRY4 1105 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 TMEM110-MUSTN1A8MSY1 372 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 GFRA2O00451 464 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 ARHGAP6O43182 974 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 CREB3O43889 395 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 RNF40O75150 1001 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 LRCH4O75427 683 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 PROSCO94903 275 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 PABPC1P11940 636 aaKnown RBP14.53□□□□□ -0.08
SSBP3-208ENST00000444533 MIPP30301 263 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 OR1E1P30953 314 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 L1CAMP32004 1257 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 ETFBP38117 255 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 GGCXP38435 758 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 CCR3P51677 355 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 NRG1Q02297 640 aaPredicted RBP14.53□□□□□ -0.08
SSBP3-208ENST00000444533 KIF5AQ12840 1032 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 DMC1Q14565 340 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 MESDQ14696 234 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 RNF219Q5W0B1 726 aaPredicted RBP14.53□□□□□ -0.08
SSBP3-208ENST00000444533 CCAR2Q8N163 923 aaKnown RBP14.53□□□□□ -0.08
SSBP3-208ENST00000444533 SPEM1Q8N4L4 309 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 CCDC185Q8N715 623 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 ZNF513Q8N8E2 541 aaPredicted RBP14.53□□□□□ -0.08
SSBP3-208ENST00000444533 DTWD2Q8NBA8 298 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 TRIM7Q9C029 511 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 MUC3BQ9H195 1237 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 DHX35Q9H5Z1 703 aaKnown RBP14.53□□□□□ -0.08
SSBP3-208ENST00000444533 ZWILCHQ9H900 591 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 C11orf16Q9NQ32 467 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 RBM12Q9NTZ6 932 aaKnown RBP14.53□□□□□ -0.08
SSBP3-208ENST00000444533 SLC8A2Q9UPR5 921 aa14.53□□□□□ -0.08
SSBP3-208ENST00000444533 A0A0A6YYK5 440 aaPredicted RBP14.52□□□□□ -0.09
SSBP3-208ENST00000444533 PI15O43692 258 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 RHOCP08134 193 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 KRT7P08729 469 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 EPHB2P29323 1055 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 MAN1A1P33908 653 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 TIE1P35590 1138 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 NNMTP40261 264 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 ARL4AP40617 200 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 SLC1A1P43005 524 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 SGSHP51688 502 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 TPI1P60174 286 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 ST8SIA6P61647 398 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 SULT2A1Q06520 285 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 C2orf27AQ580R0 203 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 EOGTQ5NDL2 527 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 NAIF1Q69YI7 327 aaPredicted RBP14.52□□□□□ -0.09
SSBP3-208ENST00000444533 SETD3Q86TU7 594 aaPredicted RBP14.52□□□□□ -0.09
SSBP3-208ENST00000444533 LRRC8AQ8IWT6 810 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 CHPFQ8IZ52 775 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 TMEM105Q8N8V8 129 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 RPLP0P6Q8NHW5 317 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 HSPH1Q92598 858 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 IGSF8Q969P0 613 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 BTBD6Q96KE9 485 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 TSGA10Q9BZW7 698 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 FBRSL1Q9HCM7 1045 aaKnown RBP14.52□□□□□ -0.09
SSBP3-208ENST00000444533 OSGEPQ9NPF4 335 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 TMPRSS4Q9NRS4 437 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 HCN4Q9Y3Q4 1203 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 MIA3Q5JRA6 1907 aa14.52□□□□□ -0.09
SSBP3-208ENST00000444533 IGLV3-10A0A075B6K4 115 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 SHISA7A6NL88 538 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 DRGXA6NNA5 263 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 K7EQS6 105 aa14.51□□□□□ -0.09
SSBP3-208ENST00000444533 EEF2KO00418 725 aaKnown RBP14.51□□□□□ -0.09
SSBP3-208ENST00000444533 FGF10O15520 208 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms