RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 NUP205Q92621 2012 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 F5H5T6 163 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 ENDOD1O94919 500 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 LUC7L3O95232 432 aaKnown RBP22.57■■□□□ 1.2
TRAF4-205ENST00000444415 DEUP1Q05D60 604 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 ASIC2Q16515 512 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 CCDC14Q49A88 953 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 AHI1Q8N157 1196 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 CARNMT1Q8N4J0 409 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 C3orf20Q8ND61 904 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 OR52K2Q8NGK3 314 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 WFIKKN2Q8TEU8 576 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 RXFP2Q8WXD0 754 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 RUBCNQ92622 972 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 RNF34Q969K3 372 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 MYO19Q96H55 970 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 TSPY26PQ9H489 355 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 POLMQ9NP87 494 aaPredicted RBP22.57■■□□□ 1.2
TRAF4-205ENST00000444415 CD93Q9NPY3 652 aa22.57■■□□□ 1.2
TRAF4-205ENST00000444415 GON4LQ3T8J9 2241 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 NDUFV2P19404 249 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 BCKDHBP21953 392 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 RFC1P35251 1148 aaPredicted RBP22.56■■□□□ 1.2
TRAF4-205ENST00000444415 C1QBPQ07021 282 aaKnown RBP22.56■■□□□ 1.2
TRAF4-205ENST00000444415 C5orf22Q49AR2 442 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 BRMS1LQ5PSV4 323 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 PPP1R15BQ5SWA1 713 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 SFMBT2Q5VUG0 894 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 HGSNATQ68CP4 663 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 MBLAC2Q68D91 279 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 ACAD10Q6JQN1 1059 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 RLN3Q8WXF3 142 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 XPO4Q9C0E2 1151 aaKnown RBP22.56■■□□□ 1.2
TRAF4-205ENST00000444415 DUSP15Q9H1R2 295 aaPredicted RBP22.56■■□□□ 1.2
TRAF4-205ENST00000444415 TMEM245Q9H330 911 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 WDCPQ9H6R7 721 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 VANGL2Q9ULK5 521 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 NYNRINQ9P2P1 1898 aaKnown RBP22.56■■□□□ 1.2
TRAF4-205ENST00000444415 CEP192Q8TEP8 1941 aa22.56■■□□□ 1.2
TRAF4-205ENST00000444415 A0A1W2PQJ5 194 aa22.55■■□□□ 1.2
TRAF4-205ENST00000444415 DDX3XO00571 662 aaKnown RBP eCLIP22.55■■□□□ 1.27e-11■■■■■ 53.4
TRAF4-205ENST00000444415 GYPCP04921 128 aa22.55■■□□□ 1.2
TRAF4-205ENST00000444415 SKILP12757 684 aa22.55■■□□□ 1.2
TRAF4-205ENST00000444415 P2RY2P41231 377 aa22.55■■□□□ 1.2
TRAF4-205ENST00000444415 ATP11AP98196 1134 aa22.55■■□□□ 1.2
TRAF4-205ENST00000444415 PLK5Q496M5 336 aa22.55■■□□□ 1.2
TRAF4-205ENST00000444415 LAIR1Q6GTX8 287 aa22.55■■□□□ 1.2
TRAF4-205ENST00000444415 CXorf57Q6NSI4 855 aaKnown RBP22.55■■□□□ 1.2
TRAF4-205ENST00000444415 FAM131BQ86XD5 332 aa22.55■■□□□ 1.2
TRAF4-205ENST00000444415 MCOLN2Q8IZK6 566 aa22.55■■□□□ 1.2
TRAF4-205ENST00000444415 CCAR2Q8N163 923 aaKnown RBP22.55■■□□□ 1.2
TRAF4-205ENST00000444415 ZC3H10Q96K80 434 aaKnown RBP22.55■■□□□ 1.2
TRAF4-205ENST00000444415 PARD6AQ9NPB6 346 aa22.55■■□□□ 1.2
TRAF4-205ENST00000444415 SLC12A6Q9UHW9 1150 aa22.55■■□□□ 1.2
TRAF4-205ENST00000444415 CALB1P05937 261 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 CCDC172P0C7W6 258 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 HLA-EP13747 358 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 RRM1P23921 792 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 RDXP35241 583 aaKnown RBP22.54■■□□□ 1.2
TRAF4-205ENST00000444415 CDH18Q13634 790 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 MAP7D1Q3KQU3 841 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 WDR59Q6PJI9 974 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 CEP68Q76N32 757 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 APCDD1Q8J025 514 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 ZNF366Q8N895 744 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 RNF214Q8ND24 703 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 CENPIQ92674 756 aaPredicted RBP22.54■■□□□ 1.2
TRAF4-205ENST00000444415 TTC17Q96AE7 1141 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 MKRN2Q9H000 416 aaKnown RBP22.54■■□□□ 1.2
TRAF4-205ENST00000444415 MBD1Q9UIS9 605 aaPredicted RBP22.54■■□□□ 1.2
TRAF4-205ENST00000444415 A0A1B0GVM2 712 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 TYW5A2RUC4 315 aaKnown RBP22.54■■□□□ 1.2
TRAF4-205ENST00000444415 TCAF2A6NFQ2 919 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 NPC1O15118 1278 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 TIMM44O43615 452 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 CNTN5O94779 1100 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 ALDH1A2O94788 518 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 F9P00740 461 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 KRT3P12035 628 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 PDGFRAP16234 1089 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 CSKP41240 450 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 CTSOP43234 321 aaPredicted RBP22.54■■□□□ 1.2
TRAF4-205ENST00000444415 PTPN9P43378 593 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 NUMBP49757 651 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 COPAP53621 1224 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 HDAC4P56524 1084 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 RPL7AP62424 266 aaKnown RBP22.54■■□□□ 1.2
TRAF4-205ENST00000444415 CDO1Q16878 200 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 UCMAQ8WVF2 138 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 MRGPRX3Q96LB0 322 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 MRGPRX1Q96LB2 322 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 RPRD1AQ96P16 312 aaPredicted RBP22.54■■□□□ 1.2
TRAF4-205ENST00000444415 SIK2Q9H0K1 926 aa22.54■■□□□ 1.2
TRAF4-205ENST00000444415 CHD5Q8TDI0 1954 aa22.53■■□□□ 1.2
TRAF4-205ENST00000444415 SIGLEC16A6NMB1 481 aa22.53■■□□□ 1.2
TRAF4-205ENST00000444415 TMCO5BA8MYB1 307 aa22.53■■□□□ 1.2
TRAF4-205ENST00000444415 DLDP09622 509 aaKnown RBP22.53■■□□□ 1.2
TRAF4-205ENST00000444415 TNFAIP3P21580 790 aa22.53■■□□□ 1.2
TRAF4-205ENST00000444415 MZF1P28698 734 aaPredicted RBP22.53■■□□□ 1.2
TRAF4-205ENST00000444415 OGDHQ02218 1023 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms