RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 CCAR2Q8N163 923 aaKnown RBP12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 CCDC185Q8N715 623 aa12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 IL17RCQ8NAC3 791 aa12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 WFIKKN2Q8TEU8 576 aa12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 ATRIPQ8WXE1 791 aa12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 CCDC42Q96M95 316 aa12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 ACOX2Q99424 681 aa12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 CHP1Q99653 195 aa12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 PRMT1Q99873 361 aaKnown RBP12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 TRIM7Q9C029 511 aa12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 THAP2Q9H0W7 228 aa12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 MRPL47Q9HD33 250 aaKnown RBP12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 SPTLC3Q9NUV7 552 aa12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 MMP17Q9ULZ9 603 aa12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 SLC27A6Q9Y2P4 619 aa12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 RAD54BQ9Y620 910 aa12.6□□□□□ -0.39
SLC48A1-202ENST00000442892 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 A0A1B0GVM2 712 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 TCRBV5S1A1TA0A578 114 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 TCRBV21S2A2A0A5A6 115 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 TCAF2A6NFQ2 919 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 E9PAM4 449 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 GFRA2O00451 464 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 CNTN5O94779 1100 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 MOCS3O95396 460 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 NTSR1P30989 418 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 SSR1P43307 286 aaKnown RBP12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 NRLP54845 237 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 HDAC4P56524 1084 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 OGDHQ02218 1023 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 ZNF177Q13360 481 aaPredicted RBP12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 FUT11Q495W5 492 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 FSCBQ5H9T9 825 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 EFHC2Q5JST6 749 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 PPP1R15BQ5SWA1 713 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 MPP7Q5T2T1 576 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 TTC39BQ5VTQ0 682 aaPredicted RBP12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 MBLAC2Q68D91 279 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 PLEKHA7Q6IQ23 1121 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 SYT13Q7L8C5 426 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 ZNF557Q8N988 423 aaPredicted RBP12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 SPC24Q8NBT2 197 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 HMGB4Q8WW32 186 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 FAM122AQ96E09 287 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 MRFAP1L1Q96HT8 127 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 PHOX2BQ99453 314 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 CNPY3Q9BT09 278 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 NUP85Q9BW27 656 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 TPSD1Q9BZJ3 242 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 ISCUQ9H1K1 167 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 NHEJ1Q9H9Q4 299 aaPredicted RBP12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 POLMQ9NP87 494 aaPredicted RBP12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 ELOVL2Q9NXB9 296 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 MPP6Q9NZW5 540 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 PCSK1NQ9UHG2 260 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 FBXO10Q9UK96 956 aa12.59□□□□□ -0.39
SLC48A1-202ENST00000442892 SPAG17Q6Q759 2223 aa12.58□□□□□ -0.39
SLC48A1-202ENST00000442892 A0A0A0MRY4 1105 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 WASH3PC4AMC7 463 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 I6L893 689 aaPredicted RBP12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 K7ESF4 209 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 ZBTB24O43167 697 aaPredicted RBP12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 ADAM23O75077 832 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 RNF8O76064 485 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 ALDH1A2O94788 518 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 APBB3O95704 486 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 RHOCP08134 193 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 HLA-EP13747 358 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 HNRNPH3P31942 346 aaKnown RBP12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 CSKP41240 450 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 GALCP54803 685 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 TBX2Q13207 712 aaPredicted RBP12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 SRSF5Q13243 272 aaKnown RBP12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 ZNF234Q14588 700 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 EIF4HQ15056 248 aaKnown RBP12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 SLC18A3Q16572 532 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 RNF219Q5W0B1 726 aaPredicted RBP12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 TMEM215Q68D42 235 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 SERPINA13PQ6UXR4 307 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 TMEM92Q6UXU6 159 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 PRR23BQ6ZRT6 265 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 SLFN11Q7Z7L1 901 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 CACUL1Q86Y37 369 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 ZNF366Q8N895 744 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 FIBINQ8TAL6 211 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 CTNNBL1Q8WYA6 563 aaPredicted RBP12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 ARHGEF26Q96DR7 871 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 BTBD6Q96KE9 485 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 HAPLN3Q96S86 360 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 PACSIN1Q9BY11 444 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 IRX2Q9BZI1 471 aaPredicted RBP12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 MUC3BQ9H195 1237 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 TMEM51Q9NW97 253 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 GPATCH2LQ9NWQ4 482 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 ZSCAN32Q9NX65 697 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 KIAA1522Q9P206 1035 aaPredicted RBP12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 CTTNBP2NLQ9P2B4 639 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 ANAPC7Q9UJX3 599 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 PLA2G4CQ9UP65 541 aa12.58□□□□□ -0.4
SLC48A1-202ENST00000442892 STON1Q9Y6Q2 735 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms