RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 SLC16A3O15427 465 aaKnown RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 TNFSF14O43557 240 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 PCDHGA12O60330 932 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 ACSL4O60488 711 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 SIN3BO75182 1162 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 DNTTP04053 509 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 FYNP06241 537 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 ATP5BP06576 529 aaKnown RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 VDRP11473 427 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 POLR2EP19388 210 aaKnown RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 CSKP41240 450 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 GRK6P43250 576 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 SLC11A2P49281 568 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 CCT8P50990 548 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 CYP4F3Q08477 520 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 KCNJ12Q14500 433 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 SUZ12Q15022 739 aaKnown RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 TTC31Q49AM3 519 aaPredicted RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 PRAMEF14Q5SWL7 426 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 NUGGCQ68CJ6 796 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 ZNF776Q68DI1 518 aaPredicted RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 TMEM270Q6UE05 265 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 LCLAT1Q6UWP7 414 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 MMS22LQ6ZRQ5 1243 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 SCML4Q8N228 414 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 HJURPQ8NCD3 748 aaPredicted RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 ERCC4Q92889 916 aaPredicted RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 TTC17Q96AE7 1141 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 FCRL2Q96LA5 508 aaPredicted RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 MRGPRX3Q96LB0 322 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 SLC6A18Q96N87 628 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 BBC3Q96PG8 261 aaPredicted RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 NUCKS1Q9H1E3 243 aaKnown RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 PABPC3Q9H361 631 aaKnown RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 FBRSQ9HAH7 460 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 EBF2Q9HAK2 575 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 SGK2Q9HBY8 427 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 STIM2Q9P246 746 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 DKK4Q9UBT3 224 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 ARMCX3Q9UH62 379 aaPredicted RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 KIAA1257Q9ULG3 409 aa8.66□□□□□ -1.02
TOP3B-209ENST00000442653 TP53BP1Q12888 1972 aaPredicted RBP8.66□□□□□ -1.02
TOP3B-209ENST00000442653 A0A1W2PP55 124 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 C10orf142B7Z368 130 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 M0QYV0 167 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 CBX4O00257 560 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 WNT9AO14904 365 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 VILLO15195 856 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 MID1O15344 667 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 IRAK2O43187 625 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 LTFP02788 710 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 WNT1P04628 370 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 PAEPP09466 180 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 TBXAS1P24557 533 aaPredicted RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 BRD2P25440 801 aaKnown RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 CTSOP43234 321 aaPredicted RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 GALCP54803 685 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 CLDN6P56747 220 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 TBX4P57082 545 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 YWHAEP62258 255 aaKnown RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 RACK1P63244 317 aaKnown RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 FKBP3Q00688 224 aaKnown RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 SHBQ15464 509 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 SMAD1Q15797 465 aaKnown RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 CST6Q15828 149 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 HNRNPA1L2Q32P51 320 aaKnown RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 FSCBQ5H9T9 825 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 C9orf64Q5T6V5 341 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 ZNF658Q5TYW1 1059 aaPredicted RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 KIAA0895LQ68EN5 471 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 NCEH1Q6PIU2 408 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 DHRS13Q6UX07 377 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 USP30Q70CQ3 517 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 GATAD2AQ86YP4 633 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 MMAAQ8IVH4 418 aaKnown RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 MFN1Q8IWA4 741 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 UNC45BQ8IWX7 931 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 DHX40Q8IX18 779 aaKnown RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 FMR1NBQ8N0W7 255 aaPredicted RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 CFAP52Q8N1V2 620 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 FIBINQ8TAL6 211 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 ADAM32Q8TC27 787 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 DQX1Q8TE96 717 aaKnown RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 GANCQ8TET4 914 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 IRGQQ8WZA9 623 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 SLC39A7Q92504 469 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 GOLGA1Q92805 767 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 CRELD1Q96HD1 420 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 LRIG1Q96JA1 1093 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 SCAND2PQ9GZW5 306 aaPredicted RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 SCUBE2Q9NQ36 999 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 RYDENQ9NUL5 291 aaKnown RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 FBXL12Q9NXK8 326 aa8.65□□□□□ -1.02
TOP3B-209ENST00000442653 XPO7Q9UIA9 1087 aaKnown RBP8.65□□□□□ -1.02
TOP3B-209ENST00000442653 PTPRQQ9UMZ3 2332 aa8.65□□□□□ -1.03
TOP3B-209ENST00000442653 A0A1B0GTQ1 180 aa8.64□□□□□ -1.03
TOP3B-209ENST00000442653 A0A1W2PPC4 97 aa8.64□□□□□ -1.03
TOP3B-209ENST00000442653 TTC34A8MYJ7 566 aa8.64□□□□□ -1.03
TOP3B-209ENST00000442653 PAPSS1O43252 624 aaPredicted RBP8.64□□□□□ -1.03
TOP3B-209ENST00000442653 RNASEH2AO75792 299 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms