RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 STX1AQ16623 288 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 PPM1JQ5JR12 505 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 SASS6Q6UVJ0 657 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 MMS22LQ6ZRQ5 1243 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 CHSY1Q86X52 802 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 CARNMT1Q8N4J0 409 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 EPS8L1Q8TE68 723 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 PRCCQ92733 491 aaPredicted RBP19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 NT5C3BQ969T7 300 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 TOE1Q96GM8 510 aaKnown RBP19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 MRGPRX3Q96LB0 322 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 PRSS16Q9NQE7 514 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 LIMA1Q9UHB6 759 aaKnown RBP19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 SIK3Q9Y2K2 1263 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 KNL1Q8NG31 2342 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 LRRC10BA6NIK2 292 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 C4orf47A7E2U8 309 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 MBD3O95983 291 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 SLC2A3P11169 496 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 SCNN1AP37088 669 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 CSKP41240 450 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 MATKP42679 507 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 CDH18Q13634 790 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 TAF3Q5VWG9 929 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 APTXQ7Z2E3 356 aaKnown RBP19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 XYLT1Q86Y38 959 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 HSPA12BQ96MM6 686 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 NPY6RQ99463 290 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 SYNCQ9H7C4 482 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 CAPN10Q9HC96 672 aa19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 NOCTQ9UK39 431 aaKnown RBP19.56■□□□□ 0.72
HMGB3P22-201ENST00000442010 SYNJ2BP-COX16A0A087WUM0 186 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 F5H5T6 163 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 NDUFS2O75306 463 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 LSM8O95777 96 aaKnown RBP19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 ASLP04424 464 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 MMEP08473 750 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 ADRB1P08588 477 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 ZNF18P17022 549 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 TFE3P19532 575 aaPredicted RBP19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 COPB1P53618 953 aaKnown RBP19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 NOMO3P69849 1222 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 MYL5Q02045 173 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 DUOXA1Q1HG43 343 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 PITRM1Q5JRX3 1037 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 CCDC183Q5T5S1 534 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 KDM1BQ8NB78 822 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 CEP76Q8TAP6 659 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 C18orf8Q96DM3 657 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 PGAP3Q96FM1 320 aaPredicted RBP19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 FBRSQ9HAH7 460 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 TMEM9BQ9NQ34 198 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 COX16Q9P0S2 106 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 KIAA1522Q9P206 1035 aaPredicted RBP19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 SLC12A6Q9UHW9 1150 aa19.55■□□□□ 0.72
HMGB3P22-201ENST00000442010 TPRP12270 2363 aaKnown RBP19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 I6L893 689 aaPredicted RBP19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 M0QYT0 321 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 SERPINF2P08697 491 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 ABCB4P21439 1286 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 OXTRP30559 389 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 POLR2FP61218 127 aaKnown RBP19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 ARID5BQ14865 1188 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 PLEKHG6Q3KR16 790 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 C5orf22Q49AR2 442 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 FBXL22Q6P050 247 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 ERICH1Q86X53 443 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 CACUL1Q86Y37 369 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 APCDD1Q8J025 514 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 CCAR2Q8N163 923 aaKnown RBP19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 CADM4Q8NFZ8 388 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 DNASE2BQ8WZ79 361 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 FOXJ1Q92949 421 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 IGSF8Q969P0 613 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 NUSAP1Q9BXS6 441 aaKnown RBP19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 PDCL3Q9H2J4 239 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 MTG2Q9H4K7 406 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 ANLNQ9NQW6 1124 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 FAM207AQ9NSI2 230 aaPredicted RBP19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 PIGVQ9NUD9 493 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 ARHGEF38Q9NXL2 777 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 RRN3Q9NYV6 651 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 TMEM63CQ9P1W3 806 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 SUN2Q9UH99 717 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 SLC6A14Q9UN76 642 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 DAAM1Q9Y4D1 1078 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 HS3ST4Q9Y661 456 aa19.54■□□□□ 0.72
HMGB3P22-201ENST00000442010 ITIH6Q6UXX5 1313 aa19.53■□□□□ 0.72
HMGB3P22-201ENST00000442010 H0Y626 953 aa19.53■□□□□ 0.72
HMGB3P22-201ENST00000442010 GFPT2O94808 682 aa19.53■□□□□ 0.72
HMGB3P22-201ENST00000442010 CYP1A1P04798 512 aaPredicted RBP19.53■□□□□ 0.72
HMGB3P22-201ENST00000442010 SRPRAP08240 638 aaKnown RBP19.53■□□□□ 0.72
HMGB3P22-201ENST00000442010 CHRNB2P17787 502 aa19.53■□□□□ 0.72
HMGB3P22-201ENST00000442010 ENGP17813 658 aa19.53■□□□□ 0.72
HMGB3P22-201ENST00000442010 SOX5P35711 763 aa19.53■□□□□ 0.72
HMGB3P22-201ENST00000442010 CTSOP43234 321 aaPredicted RBP19.53■□□□□ 0.72
HMGB3P22-201ENST00000442010 CXCR3P49682 368 aa19.53■□□□□ 0.72
HMGB3P22-201ENST00000442010 IRAK1P51617 712 aa19.53■□□□□ 0.72
HMGB3P22-201ENST00000442010 PLK1P53350 603 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms