RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 GEMIN4P57678 1058 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 DUSP4Q13115 394 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 CBLBQ13191 982 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 NAB1Q13506 487 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 TMED2Q15363 201 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 HECTD3Q5T447 861 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 SDHAF4Q5VUM1 108 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 PRSS55Q6UWB4 352 aaPredicted RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 MICALCLQ6ZW33 695 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 DDX53Q86TM3 631 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 LINC00523Q86TU6 105 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 CHSY1Q86X52 802 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 ANKMY2Q8IV38 441 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 GABPB2Q8TAK5 448 aaPredicted RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 EPS8L3Q8TE67 593 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 CASP10Q92851 521 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 ZBTB9Q96C00 473 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 P2RY11Q96G91 374 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 FCRL2Q96LA5 508 aaPredicted RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 GCNAQ96QF7 691 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 EPB41L4BQ9H329 900 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 KCNK9Q9NPC2 374 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 MRPL17Q9NRX2 175 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 ZC3H7BQ9UGR2 993 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 DNMT3LQ9UJW3 386 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 MAGED2Q9UNF1 606 aaPredicted RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 CHMP2BQ9UQN3 213 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 MAD1L1Q9Y6D9 718 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 TANC1Q9C0D5 1861 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 TBC1D4O60343 1298 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 CCNCP24863 283 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 CA8P35219 290 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 ATP5C1P36542 298 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 HARS2P49590 506 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 SERPINB9P50453 376 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 GEMP55040 296 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 DSG1Q02413 1049 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 LONRF1Q17RB8 773 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 RABGAP1LQ5R372 815 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 ANKRD22Q5VYY1 191 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 NAPEPLDQ6IQ20 393 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 FAM117BQ6P1L5 589 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 PSRC1Q6PGN9 363 aaPredicted RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 RNF19BQ6ZMZ0 732 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 ELMOD1Q8N336 334 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 RTL3Q8N8U3 475 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 DIS3LQ8TF46 1054 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 CENPTQ96BT3 561 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 ALKBH8Q96BT7 664 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 CFAP36Q96G28 342 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 TSGA13Q96PP4 275 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 SMC6Q96SB8 1091 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 ZYG11BQ9C0D3 744 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 ACSS3Q9H6R3 686 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 CWH43Q9H720 699 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 CYP4F11Q9HBI6 524 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 INTS9Q9NV88 658 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.19□□□□□ -1.42
VPS50-205ENST00000441602 SFMBT1Q9UHJ3 866 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 SMG5Q9UPR3 1016 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 SLC27A5Q9Y2P5 690 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 ASB3Q9Y575 518 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 TTC3P53804 2025 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 SDR42E2A6NKP2 422 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 WASH4PA8MWX3 477 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 KCNU1A8MYU2 1149 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 E9PAM4 449 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 F5H5T6 163 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 DFFAO00273 331 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 TMEM63AO94886 807 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 FGBP02675 491 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 HOXC13P31276 330 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 GARSP41250 739 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 ELK3P41970 407 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 NDST2P52849 883 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 MLLT6P55198 1093 aaPredicted RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 WDR5P61964 334 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 PABPC1LQ4VXU2 614 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 CASC4Q6P4E1 433 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 ELMSAN1Q6PJG2 1045 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 C3orf62Q6ZUJ4 267 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 CCDC149Q6ZUS6 474 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 ZNF354CQ86Y25 554 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 CCDC117Q8IWD4 279 aaPredicted RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 ZNF461Q8TAF7 563 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 GIPC2Q8TF65 315 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 PLD4Q96BZ4 506 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 STAMBPL1Q96FJ0 436 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 LRRC40Q9H9A6 602 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 NMUR1Q9HB89 426 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 PPARGC1AQ9UBK2 798 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 ZMYND8Q9ULU4 1186 aaPredicted RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 AAR2Q9Y312 384 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 RWDD3Q9Y3V2 267 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 TYW5A2RUC4 315 aaKnown RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 TLR5O60602 858 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 SHOX2O60902 331 aaPredicted RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 KRT37O76014 449 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 MAP3K6O95382 1288 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 MAPKAPK2P49137 400 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms