RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 LTFP02788 710 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 GSTA1P08263 222 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 GHRP10912 638 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 IL4RP24394 825 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 THPOP40225 353 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 MAGEA9P43362 315 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 HCAR3P49019 387 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 GLUD2P49448 558 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 SCNN1GP51170 649 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 DEUP1Q05D60 604 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 GPM6BQ13491 265 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 FASTKD3Q14CZ7 662 aaKnown RBP9.42□□□□□ -0.9
HDAC6-209ENST00000440653 PAFAH1B3Q15102 231 aaKnown RBP9.42□□□□□ -0.9
HDAC6-209ENST00000440653 PRKD1Q15139 912 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-209ENST00000440653 UPP1Q16831 310 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 BBS9Q3SYG4 887 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 OTUD1Q5VV17 481 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-209ENST00000440653 ANKRD22Q5VYY1 191 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 NCBP2-AS2Q69YL0 99 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 ZNF449Q6P9G9 518 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 C1orf228Q6PIY5 440 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 ADGRD1Q6QNK2 874 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 NPNTQ6UXI9 565 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 AGMOQ6ZNB7 445 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 C4orf50Q6ZRC1 276 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 PRUNE1Q86TP1 453 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 CCNJLQ8IV13 435 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 PALM2Q8IXS6 379 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 DEFB106AQ8N104 65 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 DCLK2Q8N568 766 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 CCDC185Q8N715 623 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 GSTCDQ8NEC7 633 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 CLEC4CQ8WTT0 213 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 CKAP2Q8WWK9 683 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 SEC16BQ96JE7 1060 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 SPATA13Q96N96 652 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 EPAS1Q99814 870 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 PRMT1Q99873 361 aaKnown RBP9.42□□□□□ -0.9
HDAC6-209ENST00000440653 NAT9Q9BTE0 207 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 RASSF4Q9H2L5 321 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 TRABDQ9H4I3 376 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 IGFLR1Q9H665 355 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 USP29Q9HBJ7 922 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 CSNK1G1Q9HCP0 422 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 CRTAC1Q9NQ79 661 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 ARHGEF4Q9NR80 690 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 RAB6BQ9NRW1 208 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 GPATCH2LQ9NWQ4 482 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 SAE1Q9UBE0 346 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-209ENST00000440653 CD207Q9UJ71 328 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 ZNF180Q9UJW8 692 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 PADI3Q9ULW8 664 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 HEY1Q9Y5J3 304 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 TEX264Q9Y6I9 313 aa9.42□□□□□ -0.9
HDAC6-209ENST00000440653 FNDC1Q4ZHG4 1894 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-209ENST00000440653 ERI2A8K979 691 aaKnown RBP9.41□□□□□ -0.9
HDAC6-209ENST00000440653 H3BNC9 293 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 EEF2KO00418 725 aaKnown RBP9.41□□□□□ -0.9
HDAC6-209ENST00000440653 TRDMT1O14717 391 aaKnown RBP9.41□□□□□ -0.9
HDAC6-209ENST00000440653 MFSD11O43934 449 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 SUN1O94901 812 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 FSBPO95073 299 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 OAS1P00973 400 aaKnown RBP9.41□□□□□ -0.9
HDAC6-209ENST00000440653 INHBAP08476 426 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 VIMP08670 466 aaKnown RBP9.41□□□□□ -0.9
HDAC6-209ENST00000440653 MX2P20592 715 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 GCAP28676 217 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 RBL1P28749 1068 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 MSH2P43246 934 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 MAGEA3P43357 314 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 CLCNKBP51801 687 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 ZNF33AQ06730 810 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 DPYSQ14117 519 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 LPIN1Q14693 890 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 CA9Q16790 459 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 TRIM71Q2Q1W2 868 aaKnown RBP9.41□□□□□ -0.9
HDAC6-209ENST00000440653 DCAF6Q58WW2 860 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 ZNF618Q5T7W0 954 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 LGSNQ5TDP6 509 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 C6orf89Q6UWU4 347 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 RFX8Q6ZV50 586 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 THEM5Q8N1Q8 247 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 MDM1Q8TC05 714 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 URGCPQ8TCY9 931 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 HTR3CQ8WXA8 447 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 MYLPFQ96A32 169 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 MTBPQ96DY7 904 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 PCED1BQ96HM7 432 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 SUSD3Q96L08 255 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 PWWP2AQ96N64 755 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 PPP1R2P1Q96PQ5 205 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 FTHL17Q9BXU8 183 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 ULBP1Q9BZM6 244 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 KCNK9Q9NPC2 374 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 MKS1Q9NXB0 559 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 DTLQ9NZJ0 730 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 RABGEF1Q9UJ41 708 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 PCDHB8Q9UN66 801 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 CHMP2BQ9UQN3 213 aa9.41□□□□□ -0.9
HDAC6-209ENST00000440653 CASTOR2A6NHX0 329 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms