RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 MATKP42679 507 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 RAP1GDS1P52306 607 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 IRF9Q00978 393 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 WASHC5Q12768 1159 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 IFRD2Q12894 506 aaPredicted RBP13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 ZBTB6Q15916 424 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 PHTF2Q8N3S3 785 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 TTC39CQ8N584 583 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 ACVR1CQ8NER5 493 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 MFSD3Q96ES6 412 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 ANKRD27Q96NW4 1050 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 ANLNQ9NQW6 1124 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 PIGVQ9NUD9 493 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 KLHL8Q9P2G9 620 aaPredicted RBP13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 TIMM13Q9Y5L4 95 aaPredicted RBP13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 BIRC5O15392 142 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 MAGEC1O60732 1142 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 STAU1O95793 577 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 SETSIPP0DME0 302 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 MRPS35P82673 323 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 TUBB3Q13509 450 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 HSP90AA5PQ58FG0 334 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 THEMIS2Q5TEJ8 643 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 LRRC8BQ6P9F7 803 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 KYAT3Q6YP21 454 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 APPL2Q8NEU8 664 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 ZNF669Q96BR6 464 aaPredicted RBP13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 UNKQ9C0B0 810 aaKnown RBP13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 LRCH1Q9Y2L9 728 aa13.91□□□□□ -0.18
HERPUD1-204ENST00000439977 A0A088AWK7 358 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 EME2A4GXA9 379 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 E9PBE3 544 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 DCXO43602 365 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 KLHL41O60662 606 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 SP100P23497 879 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 IDH3AP50213 366 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 MAP3K7CLP57077 242 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 SNX16P57768 344 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 EML3Q32P44 896 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 TCHHL1Q5QJ38 904 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 DPP9Q86TI2 863 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 OSTM1Q86WC4 334 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 ZDHHC17Q8IUH5 632 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 DCLK2Q8N568 766 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 SLC7A14Q8TBB6 771 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 DNAJB3Q8WWF6 145 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 SORT1Q99523 831 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 ZNF184Q99676 751 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 ADARB2Q9NS39 739 aaKnown RBP13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 MORF4L1Q9UBU8 362 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 WDR90Q96KV7 1748 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 GOLGA8QA0A0J9YX86 632 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 GOLGA8OA6NCC3 632 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 GOLGA8NF8WBI6 632 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 SMIM24O75264 130 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 GLRA3O75311 464 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 ALDH1A2O94788 518 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 GSTA2P09210 222 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 PGAM1P18669 254 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 CPOXP36551 454 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 CCR10P46092 362 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 ACTR3P61158 418 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 KYAT1Q16773 422 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 SLC25A52Q3SY17 297 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 CERCAMQ5T4B2 595 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 C6orf163Q5TEZ5 329 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 OTUD1Q5VV17 481 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 ARHGAP17Q68EM7 881 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 MARK2Q7KZI7 788 aaKnown RBP13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 ARCQ7LC44 396 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 STRA8Q7Z7C7 330 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 SLC26A7Q8TE54 656 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 ZFP42Q96MM3 310 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 GCOM2Q9BZD3 368 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 ADAMTS10Q9H324 1103 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 SNX15Q9NRS6 342 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 MKS1Q9NXB0 559 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 COPG2Q9UBF2 871 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 SOX13Q9UN79 622 aa13.9□□□□□ -0.18
HERPUD1-204ENST00000439977 I6L893 689 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 NRP1O14786 923 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 LIN7AO14910 233 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 DYNC1LI2O43237 492 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 POLBP06746 335 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 RALBP11234 206 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 NAPRTQ6XQN6 538 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 TIFABQ6ZNK6 161 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 UNC93AQ86WB7 457 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 CCNJLQ8IV13 435 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 OR6J1Q8NGC5 347 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 PPP4R1Q8TF05 950 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 CERS2Q96G23 380 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 KCNK16Q96T55 309 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 MED10Q9BTT4 135 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 EEF2KO00418 725 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 STK10O94804 968 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 FDFT1P37268 417 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 DEUP1Q05D60 604 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 HIC1Q14526 733 aa13.89□□□□□ -0.19
HERPUD1-204ENST00000439977 ZNF792Q3KQV3 632 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms