RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 C3orf20Q8ND61 904 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 AZIN2Q96A70 460 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 DDX50Q9BQ39 737 aaKnown RBP18.3■□□□□ 0.52
CCDC188-201ENST00000439765 SELENOOQ9BVL4 669 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 STIM2Q9P246 746 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 SLC8A2Q9UPR5 921 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 CEP192Q8TEP8 1941 aa18.3■□□□□ 0.52
CCDC188-201ENST00000439765 GON4LQ3T8J9 2241 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 PRRT4C9JH25 899 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 NDUFA10O95299 355 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 CISD3P0C7P0 127 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 KRT3P12035 628 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 SDHBP21912 280 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 RRM1P23921 792 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 KIR2DL1P43626 348 aaPredicted RBP18.29■□□□□ 0.52
CCDC188-201ENST00000439765 GFPT1Q06210 699 aaPredicted RBP18.29■□□□□ 0.52
CCDC188-201ENST00000439765 RSPO4Q2I0M5 234 aaPredicted RBP18.29■□□□□ 0.52
CCDC188-201ENST00000439765 SYT13Q7L8C5 426 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 MCOLN2Q8IZK6 566 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 LGI2Q8N0V4 545 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 CFAP52Q8N1V2 620 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 ZNF513Q8N8E2 541 aaPredicted RBP18.29■□□□□ 0.52
CCDC188-201ENST00000439765 CCDC26Q8TAB7 109 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 WFDC5Q8TCV5 224 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 NT5C3BQ969T7 300 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 ACDQ96AP0 544 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 HHIPQ96QV1 700 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 SLC12A6Q9UHW9 1150 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 USP18Q9UMW8 372 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 TPRP12270 2363 aaKnown RBP18.29■□□□□ 0.52
CCDC188-201ENST00000439765 DOCK4Q8N1I0 1966 aa18.29■□□□□ 0.52
CCDC188-201ENST00000439765 NYNRINQ9P2P1 1898 aaKnown RBP18.29■□□□□ 0.52
CCDC188-201ENST00000439765 TYW5A2RUC4 315 aaKnown RBP18.28■□□□□ 0.52
CCDC188-201ENST00000439765 EIF3CLB5ME19 914 aaKnown RBP18.28■□□□□ 0.52
CCDC188-201ENST00000439765 LCA5LO95447 670 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 KLF8O95600 359 aaPredicted RBP18.28■□□□□ 0.52
CCDC188-201ENST00000439765 CHRM1P11229 460 aaPredicted RBP18.28■□□□□ 0.52
CCDC188-201ENST00000439765 GZMAP12544 262 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 PDGFRAP16234 1089 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 TACR2P21452 398 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 TNFRSF4P43489 277 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 SPEM2Q0P670 501 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 GEN1Q17RS7 908 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 C15orf59Q2T9L4 293 aaPredicted RBP18.28■□□□□ 0.52
CCDC188-201ENST00000439765 HS1BP3Q53T59 392 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 MS4A13Q5J8X5 152 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 EGFLAMQ63HQ2 1017 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 NUDT18Q6ZVK8 323 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 SND1Q7KZF4 910 aaKnown RBP eCLIP18.28■□□□□ 0.52
CCDC188-201ENST00000439765 ARCQ7LC44 396 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 DGLUCYQ7Z3D6 616 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 ANKS1BQ7Z6G8 1248 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 IL17RCQ8NAC3 791 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 TXNDC5Q8NBS9 432 aaKnown RBP18.28■□□□□ 0.52
CCDC188-201ENST00000439765 GAB3Q8WWW8 586 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 RXFP2Q8WXD0 754 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 MCEEQ96PE7 176 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 EIF3CQ99613 913 aaKnown RBP18.28■□□□□ 0.52
CCDC188-201ENST00000439765 ANLNQ9NQW6 1124 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 SPTLC3Q9NUV7 552 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 FBXO10Q9UK96 956 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 NENFQ9UMX5 172 aa18.28■□□□□ 0.52
CCDC188-201ENST00000439765 A0A0A0MRY4 1105 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 C2CD4BA6NLJ0 364 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 F5H5T6 163 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 PAGE1O75459 146 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 SDC4P31431 198 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 RDXP35241 583 aaKnown RBP18.27■□□□□ 0.52
CCDC188-201ENST00000439765 RFC1P35251 1148 aaPredicted RBP18.27■□□□□ 0.52
CCDC188-201ENST00000439765 PXNP49023 591 aaPredicted RBP18.27■□□□□ 0.52
CCDC188-201ENST00000439765 CXCR3P49682 368 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 MRPS21P82921 87 aaKnown RBP18.27■□□□□ 0.52
CCDC188-201ENST00000439765 DMC1Q14565 340 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 RAB6CQ53S08 254 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 ALKBH5Q6P6C2 394 aaKnown RBP18.27■□□□□ 0.52
CCDC188-201ENST00000439765 FAM131BQ86XD5 332 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 FAM160A2Q8N612 972 aaPredicted RBP18.27■□□□□ 0.52
CCDC188-201ENST00000439765 PGAP3Q96FM1 320 aaPredicted RBP18.27■□□□□ 0.52
CCDC188-201ENST00000439765 TKTL2Q9H0I9 626 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 RAB6CQ9H0N0 254 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 WDCPQ9H6R7 721 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 TMPRSS4Q9NRS4 437 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 ABCB8Q9NUT2 735 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 SLC27A6Q9Y2P4 619 aa18.27■□□□□ 0.52
CCDC188-201ENST00000439765 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.27■□□□□ 0.52
CCDC188-201ENST00000439765 TCRBV5S1A1TA0A578 114 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 I6L893 689 aaPredicted RBP18.26■□□□□ 0.51
CCDC188-201ENST00000439765 HLA-FP30511 346 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 RPL7AP62424 266 aaKnown RBP18.26■□□□□ 0.51
CCDC188-201ENST00000439765 CCDC122Q5T0U0 273 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 SH3PXD2AQ5TCZ1 1133 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 PPP1R2P3Q6NXS1 205 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 CEP68Q76N32 757 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 CIR1Q86X95 450 aaPredicted RBP18.26■□□□□ 0.51
CCDC188-201ENST00000439765 MFN1Q8IWA4 741 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 CARNMT1Q8N4J0 409 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 TRIM44Q96DX7 344 aaPredicted RBP18.26■□□□□ 0.51
CCDC188-201ENST00000439765 PRMT1Q99873 361 aaKnown RBP18.26■□□□□ 0.51
CCDC188-201ENST00000439765 SLC2A11Q9BYW1 496 aa18.26■□□□□ 0.51
CCDC188-201ENST00000439765 CIPCQ9C0C6 399 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms