RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 DDR2Q16832 855 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 STEAP4Q687X5 459 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 C6orf89Q6UWU4 347 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 UNC5AQ6ZN44 842 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 CYS1Q717R9 158 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 PID1Q7Z2X4 250 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 CEP57Q86XR8 500 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 CACNA2D3Q8IZS8 1091 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 PDCD7Q8N8D1 485 aaKnown RBP12.1□□□□□ -0.47
SMAD3-202ENST00000439724 SPPL2BQ8TCT7 592 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 DPF3Q92784 378 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 SEC16BQ96JE7 1060 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 MAGEB18Q96M61 343 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 KIF9Q9HAQ2 790 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 COMMD8Q9NX08 183 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 KLHL8Q9P2G9 620 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-202ENST00000439724 SFMBT1Q9UHJ3 866 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 ZNF180Q9UJW8 692 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 TRHDEQ9UKU6 1024 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 RRP15Q9Y3B9 282 aaKnown RBP12.1□□□□□ -0.47
SMAD3-202ENST00000439724 PCDHA11Q9Y5I1 949 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 IKBKGQ9Y6K9 419 aa12.1□□□□□ -0.47
SMAD3-202ENST00000439724 A0A1W2PPM1 405 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 MTMR11A4FU01 709 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 FAM159BA6NKW6 160 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 KCNK1O00180 336 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 MSI1O43347 362 aaKnown RBP12.09□□□□□ -0.47
SMAD3-202ENST00000439724 SPAG7O75391 227 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 RTN3O95197 1032 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-202ENST00000439724 ASMTLO95671 621 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 GALTP07902 379 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 CCL5P13501 91 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 GRIA1P42261 906 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 IL9RQ01113 521 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 GPR17Q13304 367 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 SPARCL1Q14515 664 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 ARTNQ5T4W7 220 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 SDHAF4Q5VUM1 108 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 ITPRIPL1Q6GPH6 555 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 YTHDF3Q7Z739 585 aaKnown RBP12.09□□□□□ -0.47
SMAD3-202ENST00000439724 PIGWQ7Z7B1 504 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 PRPF39Q86UA1 669 aaKnown RBP12.09□□□□□ -0.47
SMAD3-202ENST00000439724 SLC26A11Q86WA9 606 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 LRRC6Q86X45 466 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 CCNJLQ8IV13 435 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 C4orf33Q8N1A6 199 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 LRRC43Q8N309 656 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 MPP5Q8N3R9 675 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 LZTR1Q8N653 840 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 TTC9BQ8N6N2 239 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 ATAD1Q8NBU5 361 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 C2orf15Q8WU43 125 aaKnown RBP12.09□□□□□ -0.47
SMAD3-202ENST00000439724 TBC1D31Q96DN5 1066 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 STAMBPL1Q96FJ0 436 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 SLC39A13Q96H72 371 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 SPATA17Q96L03 361 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 TSGA13Q96PP4 275 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 GBA3Q9H227 469 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 HIPK3Q9H422 1215 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 CATSPERBQ9H7T0 1116 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 OSER1Q9NX31 292 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 CLIC5Q9NZA1 410 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 TLR6Q9Y2C9 796 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 MAD1L1Q9Y6D9 718 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 FAM169AQ9Y6X4 670 aa12.09□□□□□ -0.47
SMAD3-202ENST00000439724 SHROOM3Q8TF72 1996 aa12.08□□□□□ -0.47
SMAD3-202ENST00000439724 SDR42E2A6NKP2 422 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 TBKBP1A7MCY6 615 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 ERI2A8K979 691 aaKnown RBP12.08□□□□□ -0.48
SMAD3-202ENST00000439724 PIAS1O75925 651 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 ALDH1A2O94788 518 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 SUN1O94901 812 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 ZWINTO95229 277 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 AP2A1O95782 977 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 VIMP08670 466 aaKnown RBP12.08□□□□□ -0.48
SMAD3-202ENST00000439724 SLC2A3P11169 496 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 CPB1P15086 417 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 KRT4P19013 534 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 CA4P22748 312 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 GBP2P32456 591 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-202ENST00000439724 PSEN1P49768 467 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 USP46P62068 366 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 HTRA3P83110 453 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 TEX44Q53QW1 395 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 SLC39A5Q6ZMH5 540 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 RGS9BPQ6ZS82 235 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 ANKS3Q6ZW76 656 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 TAX1BP1Q86VP1 789 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 KLHDC8BQ8IXV7 354 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 GDAP1Q8TB36 358 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 SCLYQ96I15 445 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 FCRL2Q96LA5 508 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-202ENST00000439724 C1orf74Q96LT6 269 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 TOX2Q96NM4 488 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 PGLYRP2Q96PD5 576 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 GORASP1Q9BQQ3 440 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 NAT9Q9BTE0 207 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 CEP41Q9BYV8 373 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 SIK2Q9H0K1 926 aa12.08□□□□□ -0.48
SMAD3-202ENST00000439724 RNF208Q9H0X6 261 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms