RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 SERPINE1P05121 402 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 PRKCGP05129 697 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 C6orf222P0C671 652 aaPredicted RBP16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 PGAM1P18669 254 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 PRKCZQ05513 592 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 UNC93AQ86WB7 457 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 CCNJLQ8IV13 435 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 TRPV1Q8NER1 839 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 ARNTL2Q8WYA1 636 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 TRIB2Q92519 343 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 NDE1Q9NXR1 346 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 NR2E3Q9Y5X4 410 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 MEI4A8MW99 385 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 KLHL2O95198 593 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 ALOX15P16050 662 aaPredicted RBP16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 BST2Q10589 180 aaKnown RBP16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 GRIK4Q16099 956 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 CASC4Q6P4E1 433 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 MAVSQ7Z434 540 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 ADGRG6Q86SQ4 1221 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 REM2Q8IYK8 340 aaPredicted RBP16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 PPP1R13LQ8WUF5 828 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 NLRP7Q8WX94 980 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 CXCL16Q9H2A7 254 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 PLEKHA5Q9HAU0 1116 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 DNAJC28Q9NX36 388 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 RCOR3Q9P2K3 495 aaPredicted RBP16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 DCDC2Q9UHG0 476 aa16.84■□□□□ 0.29
CLCNKA-203ENST00000439316 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 FKBP6O75344 327 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 TRPA1O75762 1119 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 PROCP04070 461 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 GOT1P17174 413 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 KCNA4P22459 653 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 MGAT1P26572 445 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 BCAT1P54687 386 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 CRADDP78560 199 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 BEX3Q00994 111 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 SP3Q02447 781 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 INSCQ1MX18 579 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 DCAF4L1Q3SXM0 396 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 MTHFD1LQ6UB35 978 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 STRADAQ7RTN6 431 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 COLGALT1Q8NBJ5 622 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 ATP2A3Q93084 1043 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 NR1H4Q96RI1 486 aaPredicted RBP16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 SORT1Q99523 831 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 LPIN3Q9BQK8 851 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 AP5M1Q9H0R1 490 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 DPEP3Q9H4B8 488 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 FAM96AQ9H5X1 160 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 PPM1HQ9ULR3 514 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 PSAT1Q9Y617 370 aa16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 TRIP12Q14669 1992 aaPredicted RBP16.83■□□□□ 0.28
CLCNKA-203ENST00000439316 ENO4A6NNW6 628 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 MFSD11O43934 449 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 OPHN1O60890 802 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 F2P00734 622 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 ITGA2BP08514 1039 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 CHRM1P11229 460 aaPredicted RBP16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 AKR1A1P14550 325 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 GRK2P25098 689 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 CRABP2P29373 138 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 CACNA2D1P54289 1103 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 SESN2P58004 480 aaPredicted RBP16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 DSG1Q02413 1049 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 HIC1Q14526 733 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 MARCH8Q5T0T0 291 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 AAGABQ6PD74 315 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 IZUMO2Q6UXV1 221 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 ATG14Q6ZNE5 492 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 LRRC52Q8N7C0 313 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 ANKRD52Q8NB46 1076 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 OR6B3Q8NGW1 331 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 SNX27Q96L92 541 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 ZMAT2Q96NC0 199 aaKnown RBP16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 LGMNQ99538 433 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 TSC22D3Q99576 134 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 NAT9Q9BTE0 207 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 PRDM16Q9HAZ2 1276 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 SPATS2LQ9NUQ6 558 aaKnown RBP16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 SETD4Q9NVD3 440 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 TUBGCP4Q9UGJ1 667 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 APOBEC2Q9Y235 224 aaKnown RBP16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 F5H423 210 aaPredicted RBP16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 RNF103O00237 685 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 CCNT2O60583 730 aaKnown RBP16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 SIN3BO75182 1162 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 MYL4P12829 197 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 YY1P25490 414 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 ARL4AP40617 200 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 CPT1AP50416 773 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 ZBTB6Q15916 424 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 EFHC1Q5JVL4 640 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 MFSD14CQ5VZR4 134 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 C10orf107Q8IVU9 208 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 PYROXD2Q8N2H3 581 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 ECSITQ9BQ95 431 aa16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.82■□□□□ 0.28
CLCNKA-203ENST00000439316 FZD10Q9ULW2 581 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms