RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 DENND5BQ6ZUT9 1274 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 ZNF276Q8N554 614 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 DBF4BQ8NFT6 615 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 TTC17Q96AE7 1141 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 LGMNQ99538 433 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 SMOQ99835 787 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 CEP41Q9BYV8 373 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 RHOBTB2Q9BYZ6 727 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 LRMDAQ9H2I8 198 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 LRRC4Q9HBW1 653 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 PIH1D1Q9NWS0 290 aaKnown RBP14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 USH1CQ9Y6N9 552 aa14.29□□□□□ -0.12
PTCHD3-201ENST00000438700 TRIM49D1C9J1S8 452 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 C1QAP02745 245 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 SKIV2L2P42285 1042 aaKnown RBP14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 BMPR2Q13873 1038 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 HEATR6Q6AI08 1181 aaKnown RBP14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 TRMT10BQ6PF06 316 aaKnown RBP14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 ZNF534Q76KX8 674 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 LRRC6Q86X45 466 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 SIX6OS1Q8N1H7 587 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 URGCPQ8TCY9 931 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 UCMAQ8WVF2 138 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 C10orf82Q8WW14 230 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 KCTD13Q8WZ19 329 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 MYLPFQ96A32 169 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 ALKBH8Q96BT7 664 aaKnown RBP14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 RAB3IPQ96QF0 476 aaPredicted RBP14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 KCNK16Q96T55 309 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 SEZ6LQ9BYH1 1024 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 SMYD2Q9NRG4 433 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 TXLNGQ9NUQ3 528 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 TBC1D13Q9NVG8 400 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 SCN5AQ14524 2016 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 SPAG6O75602 509 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 NEFHP12036 1026 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 ATN1P54259 1190 aaPredicted RBP14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 DSC1Q08554 894 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 EFHC1Q5JVL4 640 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 OVOS1Q6IE37 1185 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 UNC5AQ6ZN44 842 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 ARCQ7LC44 396 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 SLC26A11Q86WA9 606 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 ZMIZ2Q8NF64 920 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 APOPT1Q96IL0 206 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 SUSD3Q96L08 255 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 ACBD6Q9BR61 282 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 MANSC1Q9H8J5 431 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 DSEQ9UL01 958 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 OGDHLQ9ULD0 1010 aa14.28□□□□□ -0.12
PTCHD3-201ENST00000438700 CAPN15O75808 1086 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 VAV1P15498 845 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 ARL4AP40617 200 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 MATKP42679 507 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 TKTL1P51854 596 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 C1QTNF8P60827 252 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 MRPS5P82675 430 aaKnown RBP14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 NME3Q13232 169 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 SMAD1Q15797 465 aaKnown RBP14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 PLEKHG4Q58EX7 1191 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 INTS6LQ5JSJ4 861 aaKnown RBP14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 CDHR3Q6ZTQ4 885 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 GPRIN1Q7Z2K8 1008 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 OR10T2Q8NGX3 314 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 RNF217Q8TC41 542 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 TMEM209Q96SK2 561 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 TMEM161AQ9NX61 479 aa14.27□□□□□ -0.13
PTCHD3-201ENST00000438700 CREB3O43889 395 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 MFSD11O43934 449 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 CRADDP78560 199 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 CCDC15Q0P6D6 951 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 PARP6Q2NL67 630 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 KHDC1Q4VXA5 237 aaKnown RBP14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 TAF1BQ53T94 588 aaPredicted RBP14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 FYB2Q5VWT5 728 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 COLGALT2Q8IYK4 626 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 PHC3Q8NDX5 983 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 SMARCD1Q96GM5 515 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 QKIQ96PU8 341 aaKnown RBP eCLIP14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 TMLHEQ9NVH6 421 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 DNAJB4Q9UDY4 337 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 PITPNM1O00562 1244 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 ENPP3O14638 875 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 LIN7AO14910 233 aaPredicted RBP14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 GCATO75600 419 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 WFS1O76024 890 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 APOEP02649 317 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 CSH1P0DML2 217 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 CSH2P0DML3 217 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 ZFXP17010 805 aaPredicted RBP14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 PAX3P23760 479 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 ALDH3A1P30838 453 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 OR1G1P47890 313 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 NEK3P51956 506 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 TCTN1Q2MV58 587 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 SLC25A52Q3SY17 297 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 RNF220Q5VTB9 566 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 TTC39BQ5VTQ0 682 aaPredicted RBP14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 SYPL2Q5VXT5 272 aa14.26□□□□□ -0.13
PTCHD3-201ENST00000438700 SH2D5Q6ZV89 423 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms