RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 GAS6Q14393 721 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 EFHC2Q5JST6 749 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 FAM72AQ5TYM5 149 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 FAM72DQ6L9T8 149 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 CYP4V2Q6ZWL3 525 aaPredicted RBP16.67■□□□□ 0.26
SNRPB-202ENST00000438552 ANKS1BQ7Z6G8 1248 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 SLFN11Q7Z7L1 901 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 FAM72BQ86X60 149 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 CCAR2Q8N163 923 aaKnown RBP16.67■□□□□ 0.26
SNRPB-202ENST00000438552 PYROXD2Q8N2H3 581 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 NIPA2Q8N8Q9 360 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 SLC35G2Q8TBE7 412 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 SNRNP25Q9BV90 132 aaKnown RBP16.67■□□□□ 0.26
SNRPB-202ENST00000438552 SLC2A11Q9BYW1 496 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 ZDHHC4Q9NPG8 344 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 ABCB8Q9NUT2 735 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 INTUQ9ULD6 942 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 SLC27A6Q9Y2P4 619 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 REXO2Q9Y3B8 237 aaKnown RBP16.67■□□□□ 0.26
SNRPB-202ENST00000438552 PCDHA13Q9Y5I0 950 aa16.67■□□□□ 0.26
SNRPB-202ENST00000438552 TMEM110-MUSTN1A8MSY1 372 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 PRRT4C9JH25 899 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 H0Y626 953 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 MYO1FO00160 1098 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 SRGAP2O75044 1071 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 IPO7O95373 1038 aaKnown RBP16.66■□□□□ 0.26
SNRPB-202ENST00000438552 CHRM1P11229 460 aaPredicted RBP16.66■□□□□ 0.26
SNRPB-202ENST00000438552 CD70P32970 193 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 MAGEA9P43362 315 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 PIGHQ14442 188 aaPredicted RBP16.66■□□□□ 0.26
SNRPB-202ENST00000438552 FBXO43Q4G163 708 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 PREPLQ4J6C6 727 aaPredicted RBP16.66■□□□□ 0.26
SNRPB-202ENST00000438552 ALFQ53S48 1182 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 FSCBQ5H9T9 825 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 MANEALQ5VSG8 457 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 LRRC31Q6UY01 552 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 RHOT2Q8IXI1 618 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 RPLP0P6Q8NHW5 317 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 C1orf74Q96LT6 269 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 DESI2Q9BSY9 194 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 MPP6Q9NZW5 540 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 NYNRINQ9P2P1 1898 aaKnown RBP16.66■□□□□ 0.26
SNRPB-202ENST00000438552 OR12D3Q9UGF7 316 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 GGA2Q9UJY4 613 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 AP4E1Q9UPM8 1137 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 NEU3Q9UQ49 428 aa16.66■□□□□ 0.26
SNRPB-202ENST00000438552 IGLV3-10A0A075B6K4 115 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 RCCD1A6NED2 376 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 PRPSAP2O60256 369 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 PABPC1P11940 636 aaKnown RBP16.65■□□□□ 0.26
SNRPB-202ENST00000438552 PCK1P35558 622 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 TIE1P35590 1138 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 TNFRSF4P43489 277 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 NUMBP49757 651 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 AIF1P55008 147 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 LMAN2Q12907 356 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 MTAPQ13126 283 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 ACAP1Q15027 740 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 CA9Q16790 459 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 C5orf22Q49AR2 442 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 C2orf27AQ580R0 203 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 ACBD5Q5T8D3 534 aaPredicted RBP16.65■□□□□ 0.26
SNRPB-202ENST00000438552 EMC10Q5UCC4 262 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 TMEM215Q68D42 235 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 TFAP2DQ7Z6R9 452 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 CCDC117Q8IWD4 279 aaPredicted RBP16.65■□□□□ 0.26
SNRPB-202ENST00000438552 SYNPOQ8N3V7 929 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.65■□□□□ 0.26
SNRPB-202ENST00000438552 DTWD2Q8NBA8 298 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 FIBINQ8TAL6 211 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 OSBPL2Q9H1P3 480 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 ZWILCHQ9H900 591 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 LUC7LQ9NQ29 371 aaKnown RBP16.65■□□□□ 0.26
SNRPB-202ENST00000438552 SPATA6Q9NWH7 488 aaPredicted RBP16.65■□□□□ 0.26
SNRPB-202ENST00000438552 C2orf42Q9NWW7 574 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 USP18Q9UMW8 372 aa16.65■□□□□ 0.26
SNRPB-202ENST00000438552 A0A0A0MRY4 1105 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 MTA2O94776 668 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 LRIG2O94898 1065 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 PROSCO94903 275 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 IL1R2P27930 398 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 GJC1P36383 396 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 SSR1P43307 286 aaKnown RBP16.64■□□□□ 0.25
SNRPB-202ENST00000438552 KIR2DL1P43626 348 aaPredicted RBP16.64■□□□□ 0.25
SNRPB-202ENST00000438552 NRG1Q02297 640 aaPredicted RBP16.64■□□□□ 0.25
SNRPB-202ENST00000438552 SLC25A11Q02978 314 aaKnown RBP16.64■□□□□ 0.25
SNRPB-202ENST00000438552 MESDQ14696 234 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 SMTNL2Q2TAL5 461 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 FUT11Q495W5 492 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 EGFLAMQ63HQ2 1017 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 TXNRD3NBQ6F5E7 133 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 CXorf57Q6NSI4 855 aaKnown RBP16.64■□□□□ 0.25
SNRPB-202ENST00000438552 RWDD4Q6NW29 188 aaKnown RBP16.64■□□□□ 0.25
SNRPB-202ENST00000438552 NUDT18Q6ZVK8 323 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 CHST9Q7L1S5 443 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 OR52K2Q8NGK3 314 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 USP33Q8TEY7 942 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 SORCS1Q8WY21 1168 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 TBC1D31Q96DN5 1066 aa16.64■□□□□ 0.25
SNRPB-202ENST00000438552 LMLNQ96KR4 655 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms