RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 BTN2A3PQ96KV6 586 aa15.81■□□□□ 0.12
SGCE-205ENST00000437425 B3GALT6Q96L58 329 aa15.81■□□□□ 0.12
SGCE-205ENST00000437425 FCRL2Q96LA5 508 aaPredicted RBP15.81■□□□□ 0.12
SGCE-205ENST00000437425 TSGA13Q96PP4 275 aa15.81■□□□□ 0.12
SGCE-205ENST00000437425 LGMNQ99538 433 aa15.81■□□□□ 0.12
SGCE-205ENST00000437425 SENP1Q9P0U3 644 aa15.81■□□□□ 0.12
SGCE-205ENST00000437425 PPARGC1AQ9UBK2 798 aaKnown RBP15.81■□□□□ 0.12
SGCE-205ENST00000437425 HCSTQ9UBK5 93 aa15.81■□□□□ 0.12
SGCE-205ENST00000437425 HBS1LQ9Y450 684 aaKnown RBP15.81■□□□□ 0.12
SGCE-205ENST00000437425 WDR27A2RRH5 827 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 PSMD3O43242 534 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 ABLIM3O94929 683 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 MAP3K6O95382 1288 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 URODP06132 367 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 VAV1P15498 845 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 HPDP32754 393 aaPredicted RBP15.8■□□□□ 0.12
SGCE-205ENST00000437425 OR1D2P34982 312 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 PBX3P40426 434 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 MDH1P40925 334 aaKnown RBP15.8■□□□□ 0.12
SGCE-205ENST00000437425 MMP13P45452 471 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 GPR15P49685 360 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 USP46P62068 366 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 LONRF1Q17RB8 773 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 TIGD7Q6NT04 549 aaPredicted RBP15.8■□□□□ 0.12
SGCE-205ENST00000437425 RWDD4Q6NW29 188 aaKnown RBP15.8■□□□□ 0.12
SGCE-205ENST00000437425 KLHDC10Q6PID8 442 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 PRSS55Q6UWB4 352 aaPredicted RBP15.8■□□□□ 0.12
SGCE-205ENST00000437425 CCDC13Q8IYE1 715 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 COLGALT1Q8NBJ5 622 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 UHMK1Q8TAS1 419 aaKnown RBP15.8■□□□□ 0.12
SGCE-205ENST00000437425 CENPTQ96BT3 561 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 NAT9Q9BTE0 207 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 IL23AQ9NPF7 189 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 PRDM5Q9NQX1 630 aaPredicted RBP15.8■□□□□ 0.12
SGCE-205ENST00000437425 OSER1Q9NX31 292 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 SLC27A5Q9Y2P5 690 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 TEX264Q9Y6I9 313 aa15.8■□□□□ 0.12
SGCE-205ENST00000437425 TCRBV7S3A2A0A539 114 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 TRDMT1O14717 391 aaKnown RBP15.79■□□□□ 0.12
SGCE-205ENST00000437425 VNN2O95498 520 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 CSF2RAP15509 400 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 CCNCP24863 283 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 STX2P32856 288 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 MAGEA3P43357 314 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 GEMIN4P57678 1058 aaKnown RBP15.79■□□□□ 0.12
SGCE-205ENST00000437425 RAB33AQ14088 237 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 SDHAF4Q5VUM1 108 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 NUGGCQ68CJ6 796 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 C3orf62Q6ZUJ4 267 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 STKLD1Q8NE28 680 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 CYTH2Q99418 400 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 SIK2Q9H0K1 926 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 ACSS3Q9H6R3 686 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 MARCH2Q9P0N8 246 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 MFHAS1Q9Y4C4 1052 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 PCDHB12Q9Y5F1 795 aa15.79■□□□□ 0.12
SGCE-205ENST00000437425 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.79■□□□□ 0.12
SGCE-205ENST00000437425 TRIM43BA6NCK2 446 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 SMIM23A6NLE4 172 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 E9PAM4 449 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 METTL18O95568 372 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 IGLV3-27P01718 113 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 SRGAP2BP0DMP2 458 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 DNAJB2P25686 324 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 SLCO1A2P46721 670 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 ALDH1A3P47895 512 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 TUBP50607 506 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 IRAK1P51617 712 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 GNGT1P63211 74 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 WASHC5Q12768 1159 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 PPIGQ13427 754 aaKnown RBP eCLIP15.78■□□□□ 0.12
SGCE-205ENST00000437425 FASTKD3Q14CZ7 662 aaKnown RBP15.78■□□□□ 0.12
SGCE-205ENST00000437425 VEPH1Q14D04 833 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 C10orf120Q5SQS8 335 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 B4GALNT4Q76KP1 1039 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 ZNF771Q7L3S4 317 aaPredicted RBP15.78■□□□□ 0.12
SGCE-205ENST00000437425 PID1Q7Z2X4 250 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 TTC9BQ8N6N2 239 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 RTL3Q8N8U3 475 aaKnown RBP15.78■□□□□ 0.12
SGCE-205ENST00000437425 FATE1Q969F0 183 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 TRIM43Q96BQ3 446 aaPredicted RBP15.78■□□□□ 0.12
SGCE-205ENST00000437425 TRMT2BQ96GJ1 504 aaKnown RBP15.78■□□□□ 0.12
SGCE-205ENST00000437425 MYRFLQ96LU7 910 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 YME1L1Q96TA2 773 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 KLHL8Q9P2G9 620 aaPredicted RBP15.78■□□□□ 0.12
SGCE-205ENST00000437425 UXTQ9UBK9 157 aaPredicted RBP15.78■□□□□ 0.12
SGCE-205ENST00000437425 HS3ST4Q9Y661 456 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 MSI1O43347 362 aaKnown RBP15.78■□□□□ 0.12
SGCE-205ENST00000437425 TLR5O60602 858 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 RHOQP17081 205 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 ELK3P41970 407 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 ATP1A2P50993 1020 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 NDST2P52849 883 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 NRLP54845 237 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 EFEMP1Q12805 493 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 PLD1Q13393 1074 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 COL4A6Q14031 1691 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 PRPSAP1Q14558 356 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 ANO4Q32M45 955 aa15.78■□□□□ 0.12
SGCE-205ENST00000437425 MSS51Q4VC12 460 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms