RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 CPSF4O95639 269 aaKnown RBP16.19■□□□□ 0.18
PTPN13-204ENST00000436978 RASA2Q15283 850 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 MAP1SQ66K74 1059 aaPredicted RBP16.19■□□□□ 0.18
PTPN13-204ENST00000436978 MDM1Q8TC05 714 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 TMEM120AQ9BXJ8 343 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 EXOSC4Q9NPD3 245 aaKnown RBP16.19■□□□□ 0.18
PTPN13-204ENST00000436978 GNPTGQ9UJJ9 305 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 CDH9Q9ULB4 789 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 DNAJC16Q9Y2G8 782 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 FAM220BPB1ANY3 271 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 PSMC3P17980 439 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 GP5P40197 560 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 ADCYAP1R1P41586 468 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 TMEM132CQ8N3T6 1108 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 MCCC1Q96RQ3 725 aaPredicted RBP16.19■□□□□ 0.18
PTPN13-204ENST00000436978 OSBPL10Q9BXB5 764 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 SHCBP1LQ9BZQ2 653 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 LMO7Q8WWI1 1683 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 CYP3A7-CYP3A51PA0A087WV96 503 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 UBDO15205 165 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 FGF19O95750 216 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 CYP3A7P24462 503 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 RPS7P62081 194 aaKnown RBP16.19■□□□□ 0.18
PTPN13-204ENST00000436978 RCN1Q15293 331 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 PAGE2BQ5JRK9 111 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 C2orf49Q9BVC5 232 aaPredicted RBP16.19■□□□□ 0.18
PTPN13-204ENST00000436978 PABPC1P11940 636 aaKnown RBP16.18■□□□□ 0.18
PTPN13-204ENST00000436978 RFX3P48380 749 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 CCT8P50990 548 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 PLPPR4Q7Z2D5 763 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 KLHL4Q9C0H6 718 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 TKTL2Q9H0I9 626 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 HPS4Q9NQG7 708 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 SERPINI2O75830 405 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 ZNF682O95780 498 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 KIF2BQ8N4N8 673 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 PHACTR1Q9C0D0 580 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 THAP1Q9NVV9 213 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 UBP1Q9NZI7 540 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 NR2E3Q9Y5X4 410 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 SMIM22K7EJ46 135 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 NPR3P17342 541 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 APOPT1Q96IL0 206 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 ACOX2Q99424 681 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 TDRKHQ9Y2W6 561 aaKnown RBP16.18■□□□□ 0.18
PTPN13-204ENST00000436978 DUSP10Q9Y6W6 482 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 ATRNO75882 1429 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 CCDC154A6NI56 674 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 KIF1CO43896 1103 aaKnown RBP16.18■□□□□ 0.18
PTPN13-204ENST00000436978 NOS2P35228 1153 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 PEX6Q13608 980 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 CLYBLQ8N0X4 340 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 APOL2Q9BQE5 337 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 SYBUQ9NX95 663 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 MARCH2Q9P0N8 246 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 UQCRBP14927 111 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 LUZP2Q86TE4 346 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 ZNF614Q8N883 585 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 GAKO14976 1311 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 SMIM10L2AP0DMW4 78 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 SMIM10L2BP0DMW5 78 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 UBA1P22314 1058 aaKnown RBP16.18■□□□□ 0.18
PTPN13-204ENST00000436978 SNRPD1P62314 119 aaKnown RBP16.18■□□□□ 0.18
PTPN13-204ENST00000436978 ZNF558Q96NG5 402 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 PDP2Q9P2J9 529 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 ZNF510Q9Y2H8 683 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 APOC4-APOC2K7ER74 178 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 APOC2P02655 101 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 YBX3P16989 372 aaKnown RBP eCLIP16.18■□□□□ 0.18
PTPN13-204ENST00000436978 SLC45A4Q5BKX6 768 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 CCDC81Q6ZN84 652 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 DPP10Q8N608 796 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 PGLYRP2Q96PD5 576 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 ADAM2Q99965 735 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 RXFP1Q9HBX9 757 aa16.18■□□□□ 0.18
PTPN13-204ENST00000436978 TIMM13Q9Y5L4 95 aaPredicted RBP16.18■□□□□ 0.18
PTPN13-204ENST00000436978 RGS14O43566 566 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 CYP1A1P04798 512 aaPredicted RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 FGFR1P11362 822 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 IFNGR2P38484 337 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 CNTN2Q02246 1040 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 UBE3AQ05086 875 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 KCNMA1Q12791 1236 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 GPR141Q7Z602 305 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 ARHGEF19Q8IW93 802 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 APBA2Q99767 749 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 SENP6Q9GZR1 1112 aaPredicted RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 GSTM1P09488 218 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 BDNFP23560 247 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 SERPINH1P50454 418 aaKnown RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 BSNDQ8WZ55 320 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 RNF208Q9H0X6 261 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 ASAH2Q9NR71 780 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 CHADO15335 359 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 CSDE1O75534 798 aaKnown RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 SERPINE1P05121 402 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 FAM98BQ52LJ0 330 aaKnown RBP16.17■□□□□ 0.18
PTPN13-204ENST00000436978 LRRC34Q8IZ02 419 aa16.17■□□□□ 0.18
PTPN13-204ENST00000436978 A1CFQ9NQ94 594 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms