RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 PDZD4Q76G19 769 aaPredicted RBP21.71■■□□□ 1.07
PTPRF-207ENST00000436724 IGDCC3Q8IVU1 814 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 AGGF1Q8N302 714 aaeCLIP21.71■■□□□ 1.07
PTPRF-207ENST00000436724 FBXO36Q8NEA4 188 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 SERPINB12Q96P63 405 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 EPN3Q9H201 632 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 CYP4F11Q9HBI6 524 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 MPP6Q9NZW5 540 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 MARCH2Q9P0N8 246 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 CLUHO75153 1309 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 RGS16O15492 202 aaPredicted RBP21.71■■□□□ 1.07
PTPRF-207ENST00000436724 BAIAP3O94812 1187 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 SSTR1P30872 391 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 TUFMP49411 452 aaKnown RBP21.71■■□□□ 1.07
PTPRF-207ENST00000436724 ZNF135P52742 658 aaPredicted RBP21.71■■□□□ 1.07
PTPRF-207ENST00000436724 GPX6P59796 221 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 C6orf118Q5T5N4 469 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 PYROXD1Q8WU10 500 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 PGM2Q96G03 612 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 CXXC1Q9P0U4 656 aaPredicted RBP21.71■■□□□ 1.07
PTPRF-207ENST00000436724 SHROOM3Q8TF72 1996 aa21.71■■□□□ 1.07
PTPRF-207ENST00000436724 E9PAM4 449 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 SMAPO00193 183 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 NDUFAB1O14561 156 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 TLR5O60602 858 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 ZDHHC11BP0C7U3 371 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 PSEN1P49768 467 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 ZNF567Q8N184 647 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 BADQ92934 168 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 TLCD1Q96CP7 247 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 HERC2P3Q9BVR0 1158 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 CHMP2BQ9UQN3 213 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 FAM169AQ9Y6X4 670 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 KIAA1671Q9BY89 1806 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 SLC12A8A0AV02 714 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 FOXO6A8MYZ6 492 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 PIAS1O75925 651 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 URODP06132 367 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 SERPINB6P35237 376 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 GARSP41250 739 aaKnown RBP21.7■■□□□ 1.06
PTPRF-207ENST00000436724 GRIA1P42261 906 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 TUBP50607 506 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 MLLT6P55198 1093 aaPredicted RBP21.7■■□□□ 1.06
PTPRF-207ENST00000436724 PPIDQ08752 370 aaKnown RBP21.7■■□□□ 1.06
PTPRF-207ENST00000436724 DDX53Q86TM3 631 aaKnown RBP21.7■■□□□ 1.06
PTPRF-207ENST00000436724 CAND1Q86VP6 1230 aaKnown RBP21.7■■□□□ 1.06
PTPRF-207ENST00000436724 TTC25Q96NG3 672 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 TTLL2Q9BWV7 592 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 ROPN1BQ9BZX4 212 aaPredicted RBP21.7■■□□□ 1.06
PTPRF-207ENST00000436724 ROPN1Q9HAT0 212 aaPredicted RBP21.7■■□□□ 1.06
PTPRF-207ENST00000436724 VANGL2Q9ULK5 521 aa21.7■■□□□ 1.06
PTPRF-207ENST00000436724 ELK3P41970 407 aa21.69■■□□□ 1.06
PTPRF-207ENST00000436724 MAGEA6P43360 314 aa21.69■■□□□ 1.06
PTPRF-207ENST00000436724 GALNT2Q10471 571 aa21.69■■□□□ 1.06
PTPRF-207ENST00000436724 CCDC38Q502W7 563 aa21.69■■□□□ 1.06
PTPRF-207ENST00000436724 ARHGAP36Q6ZRI8 547 aa21.69■■□□□ 1.06
PTPRF-207ENST00000436724 TBC1D31Q96DN5 1066 aa21.69■■□□□ 1.06
PTPRF-207ENST00000436724 E7EVH7 732 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 ABHD2P08910 425 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 HMGA1P17096 107 aaKnown RBP21.68■■□□□ 1.06
PTPRF-207ENST00000436724 HOXC13P31276 330 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 MS4A13Q5J8X5 152 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 UBE2Q1Q7Z7E8 422 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 ZNF512Q96ME7 567 aaPredicted RBP21.68■■□□□ 1.06
PTPRF-207ENST00000436724 UBE2OQ9C0C9 1292 aaKnown RBP21.68■■□□□ 1.06
PTPRF-207ENST00000436724 PHACTR1Q9C0D0 580 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 OLA1Q9NTK5 396 aaKnown RBP21.68■■□□□ 1.06
PTPRF-207ENST00000436724 COMMD8Q9NX08 183 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 CHD7Q9P2D1 2997 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 TBK1Q9UHD2 729 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 ZMYND8Q9ULU4 1186 aaPredicted RBP21.68■■□□□ 1.06
PTPRF-207ENST00000436724 A0A087WUV0 522 aaPredicted RBP21.68■■□□□ 1.06
PTPRF-207ENST00000436724 DFFAO00273 331 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 NCAM2O15394 837 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 STK10O94804 968 aaKnown RBP21.68■■□□□ 1.06
PTPRF-207ENST00000436724 GJB5O95377 273 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 PTPN3P26045 913 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 PSMB4P28070 264 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 SEC24CP53992 1094 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 SLC20A2Q08357 652 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 SEMA5AQ13591 1074 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 TRIP4Q15650 581 aaPredicted RBP21.68■■□□□ 1.06
PTPRF-207ENST00000436724 C4orf22Q6V702 233 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 ZNF534Q76KX8 674 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 PID1Q7Z2X4 250 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 ARFGAP2Q8N6H7 521 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 HDAC11Q96DB2 347 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 TMEM51Q9NW97 253 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 YIPF1Q9Y548 306 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 RAD54BQ9Y620 910 aa21.68■■□□□ 1.06
PTPRF-207ENST00000436724 OPHN1O60890 802 aa21.67■■□□□ 1.06
PTPRF-207ENST00000436724 APOEP02649 317 aa21.67■■□□□ 1.06
PTPRF-207ENST00000436724 FGBP02675 491 aa21.67■■□□□ 1.06
PTPRF-207ENST00000436724 LINC00271P0C7V0 271 aa21.67■■□□□ 1.06
PTPRF-207ENST00000436724 SLC2A3P11169 496 aa21.67■■□□□ 1.06
PTPRF-207ENST00000436724 ZBTB17Q13105 803 aa21.67■■□□□ 1.06
PTPRF-207ENST00000436724 C3orf62Q6ZUJ4 267 aa21.67■■□□□ 1.06
PTPRF-207ENST00000436724 ARHGAP12Q8IWW6 846 aa21.67■■□□□ 1.06
PTPRF-207ENST00000436724 SLC12A6Q9UHW9 1150 aa21.67■■□□□ 1.06
PTPRF-207ENST00000436724 TEX264Q9Y6I9 313 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms