RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 NOMO1Q15155 1222 aa23.7■■□□□ 1.39
CPSF4-204ENST00000436336 CCDC137Q6PK04 289 aaKnown RBP23.7■■□□□ 1.39
CPSF4-204ENST00000436336 NPNTQ6UXI9 565 aa23.7■■□□□ 1.39
CPSF4-204ENST00000436336 EP400NLQ6ZTU2 488 aa23.7■■□□□ 1.39
CPSF4-204ENST00000436336 ARID3BQ8IVW6 561 aaPredicted RBP23.7■■□□□ 1.39
CPSF4-204ENST00000436336 LGI2Q8N0V4 545 aa23.7■■□□□ 1.39
CPSF4-204ENST00000436336 MICALL1Q8N3F8 863 aa23.7■■□□□ 1.39
CPSF4-204ENST00000436336 ZSCAN18Q8TBC5 510 aaPredicted RBP23.7■■□□□ 1.39
CPSF4-204ENST00000436336 IGSF8Q969P0 613 aa23.7■■□□□ 1.39
CPSF4-204ENST00000436336 RPRD1AQ96P16 312 aaPredicted RBP23.7■■□□□ 1.39
CPSF4-204ENST00000436336 KIF9Q9HAQ2 790 aa23.7■■□□□ 1.39
CPSF4-204ENST00000436336 CDH22Q9UJ99 828 aa23.7■■□□□ 1.39
CPSF4-204ENST00000436336 HEY1Q9Y5J3 304 aa23.7■■□□□ 1.39
CPSF4-204ENST00000436336 DOCK8Q8NF50 2099 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 REV3LO60673 3130 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 PRAMEF12O95522 483 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 RHOQP17081 205 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 SERPINB6P35237 376 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 GPR153Q6NV75 609 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 BZW1Q7L1Q6 419 aaKnown RBP23.7■■□□□ 1.38
CPSF4-204ENST00000436336 GET4Q7L5D6 327 aaPredicted RBP23.7■■□□□ 1.38
CPSF4-204ENST00000436336 FAM217AQ8IXS0 508 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 SLC35B2Q8TB61 432 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 FGF13Q92913 245 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 MSLNLQ96KJ4 702 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 RIPOR3Q96MK2 946 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 FAM118BQ9BPY3 351 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 DONSONQ9NYP3 566 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 GDE1Q9NZC3 331 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 MFHAS1Q9Y4C4 1052 aa23.7■■□□□ 1.38
CPSF4-204ENST00000436336 MCF2LO15068 1137 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 GBE1Q04446 702 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 SNX1Q13596 522 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 BYSLQ13895 437 aaKnown RBP23.69■■□□□ 1.38
CPSF4-204ENST00000436336 RABGAP1LQ5R372 815 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 TEX35Q5T0J7 233 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 TTC27Q6P3X3 843 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 RFWD3Q6PCD5 774 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 RTL3Q8N8U3 475 aaKnown RBP23.69■■□□□ 1.38
CPSF4-204ENST00000436336 TTC16Q8NEE8 873 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 MYRIPQ8NFW9 859 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 NKD2Q969F2 451 aaPredicted RBP23.69■■□□□ 1.38
CPSF4-204ENST00000436336 RETREG1Q9H6L5 497 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 MPP6Q9NZW5 540 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 PCYOX1Q9UHG3 505 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 DNPEPQ9ULA0 475 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 RAD54BQ9Y620 910 aa23.69■■□□□ 1.38
CPSF4-204ENST00000436336 MFSD11O43934 449 aa23.68■■□□□ 1.38
CPSF4-204ENST00000436336 MTHFRP42898 656 aa23.68■■□□□ 1.38
CPSF4-204ENST00000436336 USP4Q13107 963 aa23.68■■□□□ 1.38
CPSF4-204ENST00000436336 ZNF77Q15935 545 aa23.68■■□□□ 1.38
CPSF4-204ENST00000436336 C8orf74Q6P047 294 aa23.68■■□□□ 1.38
CPSF4-204ENST00000436336 NLRP14Q86W24 1093 aa23.68■■□□□ 1.38
CPSF4-204ENST00000436336 CPXM2Q8N436 756 aa23.68■■□□□ 1.38
CPSF4-204ENST00000436336 LZTR1Q8N653 840 aa23.68■■□□□ 1.38
CPSF4-204ENST00000436336 CCDC26Q8TAB7 109 aa23.68■■□□□ 1.38
CPSF4-204ENST00000436336 TMEM248Q9NWD8 314 aa23.68■■□□□ 1.38
CPSF4-204ENST00000436336 DTLQ9NZJ0 730 aa23.68■■□□□ 1.38
CPSF4-204ENST00000436336 CHD5Q8TDI0 1954 aa23.68■■□□□ 1.38
CPSF4-204ENST00000436336 CHKAP35790 457 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 VCPP55072 806 aaKnown RBP23.67■■□□□ 1.38
CPSF4-204ENST00000436336 EIF3EP60228 445 aaKnown RBP23.67■■□□□ 1.38
CPSF4-204ENST00000436336 SLC10A2Q12908 348 aaPredicted RBP23.67■■□□□ 1.38
CPSF4-204ENST00000436336 DHX34Q14147 1143 aaKnown RBP23.67■■□□□ 1.38
CPSF4-204ENST00000436336 GLE1Q53GS7 698 aaKnown RBP23.67■■□□□ 1.38
CPSF4-204ENST00000436336 CCDC70Q6NSX1 233 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 BBS7Q8IWZ6 715 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 CCDC105Q8IYK2 499 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 CELF5Q8N6W0 485 aaKnown RBP23.67■■□□□ 1.38
CPSF4-204ENST00000436336 UBXN4Q92575 508 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 MYEOVQ96EZ4 313 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 AMACRQ9UHK6 382 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 FEZ2Q9UHY8 353 aaPredicted RBP23.67■■□□□ 1.38
CPSF4-204ENST00000436336 DRG1Q9Y295 367 aaKnown RBP23.67■■□□□ 1.38
CPSF4-204ENST00000436336 SHROOM3Q8TF72 1996 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 CNTN5O94779 1100 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 KCNJ1P48048 391 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 IRAK1P51617 712 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 XRCC4Q13426 336 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 OASLQ15646 514 aaKnown RBP23.67■■□□□ 1.38
CPSF4-204ENST00000436336 ALFQ53S48 1182 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 TTC39BQ5VTQ0 682 aaPredicted RBP23.67■■□□□ 1.38
CPSF4-204ENST00000436336 MAATS1Q7Z4T9 603 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 ATL2Q8NHH9 583 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 PRICKLE1Q96MT3 831 aaPredicted RBP23.67■■□□□ 1.38
CPSF4-204ENST00000436336 ASB16Q96NS5 453 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 OLFM3Q96PB7 478 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 CDH7Q9ULB5 785 aa23.67■■□□□ 1.38
CPSF4-204ENST00000436336 ZFP37Q9Y6Q3 630 aaPredicted RBP23.67■■□□□ 1.38
CPSF4-204ENST00000436336 SCAMP3O14828 347 aaKnown RBP23.66■■□□□ 1.38
CPSF4-204ENST00000436336 RBP3P10745 1247 aa23.66■■□□□ 1.38
CPSF4-204ENST00000436336 LMNB2Q03252 620 aa23.66■■□□□ 1.38
CPSF4-204ENST00000436336 NPWQ8N729 165 aa23.66■■□□□ 1.38
CPSF4-204ENST00000436336 KIAA1958Q8N8K9 716 aa23.66■■□□□ 1.38
CPSF4-204ENST00000436336 RIN3Q8TB24 985 aa23.66■■□□□ 1.38
CPSF4-204ENST00000436336 GRK7Q8WTQ7 553 aa23.66■■□□□ 1.38
CPSF4-204ENST00000436336 SMARCD2Q92925 531 aa23.66■■□□□ 1.38
CPSF4-204ENST00000436336 SLCO2A1Q92959 643 aa23.66■■□□□ 1.38
CPSF4-204ENST00000436336 LRRC1Q9BTT6 524 aa23.66■■□□□ 1.38
CPSF4-204ENST00000436336 KLC2Q9H0B6 622 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms