RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 TIGD2Q4W5G0 525 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 IGFN1Q86VF2 1251 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 KIAA2013Q8IYS2 634 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 SIX6OS1Q8N1H7 587 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 MPP5Q8N3R9 675 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 KCTD6Q8NC69 237 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 BPIFB6Q8NFQ5 453 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 CCDC138Q96M89 665 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 OSBPL11Q9BXB4 747 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 TRPC5Q9UL62 973 aaPredicted RBP7.64□□□□□ -1.19
CPSF6-202ENST00000435070 PCDHGA3Q9Y5H0 932 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 WNK3Q9BYP7 1800 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 TBX3O15119 743 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 BAIAP3O94812 1187 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 MYO1DO94832 1006 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 TFE3P19532 575 aaPredicted RBP7.64□□□□□ -1.19
CPSF6-202ENST00000435070 TRPC3Q13507 836 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 PHKG1Q16816 387 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 ZFP1Q6P2D0 407 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 CLIP4Q8N3C7 705 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 TMEM102Q8N9M5 508 aaPredicted RBP7.64□□□□□ -1.19
CPSF6-202ENST00000435070 FAM110BQ8TC76 370 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 TANKQ92844 425 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 ZNF577Q9BSK1 485 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 OSBPL10Q9BXB5 764 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 INO80BQ9C086 356 aaPredicted RBP7.64□□□□□ -1.19
CPSF6-202ENST00000435070 VTA1Q9NP79 307 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 SQORQ9Y6N5 450 aa7.64□□□□□ -1.19
CPSF6-202ENST00000435070 ADORA2AP29274 412 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 PRELPP51888 382 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 YWHAZP63104 245 aaKnown RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 NFIXQ14938 502 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 NEPROQ6NW34 567 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 DRICH1Q6PGQ1 229 aaPredicted RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 ALDH16A1Q8IZ83 802 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 MKL1Q969V6 931 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 RTKNQ9BST9 563 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 MARCH7Q9H992 704 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 TCF7L2Q9NQB0 619 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 TMEM216Q9P0N5 145 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 MAGED2Q9UNF1 606 aaPredicted RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 AURKCQ9UQB9 309 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 RNF103-CHMP3A0A140T963 221 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 PFDN6O15212 129 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 KCNN4O15554 427 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 SERPINE1P05121 402 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 IL1R2P27930 398 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 EEF1DP29692 281 aaKnown RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 GRIA1P42261 906 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 GPC3P51654 580 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 CAMK2BQ13554 666 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 PLA2G4FQ68DD2 849 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 ANKRD26P1Q6NSI1 321 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 ANKRD36BP1Q96IX9 119 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 SORT1Q99523 831 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 AP4E1Q9UPM8 1137 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 TPP1O14773 563 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 HTRA2O43464 458 aaPredicted RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 KRT75O95678 551 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 BCL10O95999 233 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 L1CAMP32004 1257 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 SREBF1P36956 1147 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 NR4A2P43354 598 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 TCP10Q12799 353 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 AP3B2Q13367 1082 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 RAB39AQ14964 217 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 PLCL1Q15111 1095 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 USP41Q3LFD5 358 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 C16orf89Q6UX73 402 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 ABRAQ8N0Z2 381 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 CEP295NLQ96MC4 621 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 MED10Q9BTT4 135 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 TUFT1Q9NNX1 390 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 TJP2Q9UDY2 1190 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 SERPINB13Q9UIV8 391 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 SLC8A2Q9UPR5 921 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 PRSS51A0A1B0GVH4 220 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 TMEM191CA6NGB0 347 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 FAM47E-STBD1D6RA91 191 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 TMEM191BP0C7N4 346 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 SAT1P21673 171 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 OSBPP22059 807 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 GABRB3P28472 473 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 PITRM1Q5JRX3 1037 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 RWDD4Q6NW29 188 aaKnown RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 UNC5AQ6ZN44 842 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 PIWIL3Q7Z3Z3 882 aaKnown RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 CMC1Q7Z7K0 106 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 HERC6Q8IVU3 1022 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 APBA2Q99767 749 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 CCDC68Q9H2F9 335 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 NOL6Q9H6R4 1146 aaKnown RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 CACYBPQ9HB71 228 aaKnown RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 CYP26B1Q9NR63 512 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 GMPR2Q9P2T1 348 aaKnown RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 PADI4Q9UM07 663 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 ERGIC3Q9Y282 383 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 NR2E3Q9Y5X4 410 aa7.63□□□□□ -1.19
CPSF6-202ENST00000435070 PHRF1Q9P1Y6 1649 aaKnown RBP7.63□□□□□ -1.19
CPSF6-202ENST00000435070 CHEK2O96017 543 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms