RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 RPS6KL1Q9Y6S9 549 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 F8W8V4 182 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 XPO1O14980 1071 aaKnown RBP12.12□□□□□ -0.47
CD44-209ENST00000433892 MAP3K7O43318 606 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 CD4P01730 458 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 SERPINE1P05121 402 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 POLBP06746 335 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 ACAT1P24752 427 aaKnown RBP12.12□□□□□ -0.47
CD44-209ENST00000433892 CPOXP36551 454 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 GLUD2P49448 558 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 SLC25A3Q00325 362 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 IFRD2Q12894 506 aaPredicted RBP12.12□□□□□ -0.47
CD44-209ENST00000433892 PDK1Q15118 436 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 TRMT5Q32P41 509 aaKnown RBP12.12□□□□□ -0.47
CD44-209ENST00000433892 VWA5B1Q5TIE3 1220 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 DPY19L2Q6NUT2 758 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 PID1Q7Z2X4 250 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 MAVSQ7Z434 540 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 CMC1Q7Z7K0 106 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 RSPH3Q86UC2 560 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 KBTBD2Q8IY47 623 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 B3GALNT2Q8NCR0 500 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 OR52K1Q8NGK4 314 aa12.12□□□□□ -0.47
CD44-209ENST00000433892 FCRL3Q96P31 734 aaPredicted RBP12.12□□□□□ -0.47
CD44-209ENST00000433892 PIN4Q9Y237 131 aaKnown RBP12.12□□□□□ -0.47
CD44-209ENST00000433892 ADCY6O43306 1168 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 HUS1O60921 280 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 PROCP04070 461 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 ATP5BP06576 529 aaKnown RBP12.11□□□□□ -0.47
CD44-209ENST00000433892 ANPEPP15144 967 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 PEX19P40855 299 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 TAF6P49848 677 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 RABGGTBP53611 331 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 ACTR3P61158 418 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 CCNA1P78396 465 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 SNAPC2Q13487 334 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 DBN1Q16643 649 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 DUSP28Q4G0W2 176 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 RABGAP1LQ5R372 815 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 C6orf163Q5TEZ5 329 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 OSTM1Q86WC4 334 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 CCNJLQ8IV13 435 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 TNS4Q8IZW8 715 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 ADAM32Q8TC27 787 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 AZIN2Q96A70 460 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 CERS2Q96G23 380 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 SORT1Q99523 831 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 TTC1Q99614 292 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 FERMT1Q9BQL6 677 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 NAT9Q9BTE0 207 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 SHCBP1LQ9BZQ2 653 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 YIPF3Q9GZM5 350 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 C1orf21Q9H246 121 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 PIGVQ9NUD9 493 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 GDAP2Q9NXN4 497 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 COPG2Q9UBF2 871 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 SOX13Q9UN79 622 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 MAGED2Q9UNF1 606 aaPredicted RBP12.11□□□□□ -0.47
CD44-209ENST00000433892 ZNF638Q14966 1978 aaKnown RBP12.11□□□□□ -0.47
CD44-209ENST00000433892 A0A088AWK7 358 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.11□□□□□ -0.47
CD44-209ENST00000433892 FAM72CH0Y354 149 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 EEF2KO00418 725 aaKnown RBP12.11□□□□□ -0.47
CD44-209ENST00000433892 PPP1R12AO14974 1030 aaPredicted RBP12.11□□□□□ -0.47
CD44-209ENST00000433892 SIN3BO75182 1162 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 DARSP14868 501 aaKnown RBP12.11□□□□□ -0.47
CD44-209ENST00000433892 NOS2P35228 1153 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 IDH3AP50213 366 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 ITGA9Q13797 1035 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 FAM72AQ5TYM5 149 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 FAM72DQ6L9T8 149 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 IRGCQ6NXR0 463 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 HFE2Q6ZVN8 426 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 DPP9Q86TI2 863 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 FAM72BQ86X60 149 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 RNF169Q8NCN4 708 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 GSTCDQ8NEC7 633 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 PPP4R1Q8TF05 950 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 TMEM40Q8WWA1 233 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 TNIP3Q96KP6 325 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 ZNF560Q96MR9 790 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 SIKE1Q9BRV8 207 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 DUSP16Q9BY84 665 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 SNX15Q9NRS6 342 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 DLGAP2Q9P1A6 1054 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 KLHL8Q9P2G9 620 aaPredicted RBP12.11□□□□□ -0.47
CD44-209ENST00000433892 SORCS3Q9UPU3 1222 aa12.11□□□□□ -0.47
CD44-209ENST00000433892 ARHGAP42A6NI28 874 aa12.1□□□□□ -0.47
CD44-209ENST00000433892 DAB1O75553 588 aa12.1□□□□□ -0.47
CD44-209ENST00000433892 BAG2O95816 211 aa12.1□□□□□ -0.47
CD44-209ENST00000433892 RALBP11234 206 aa12.1□□□□□ -0.47
CD44-209ENST00000433892 IGFBP6P24592 240 aaPredicted RBP12.1□□□□□ -0.47
CD44-209ENST00000433892 GP5P40197 560 aa12.1□□□□□ -0.47
CD44-209ENST00000433892 ABCG1P45844 678 aa12.1□□□□□ -0.47
CD44-209ENST00000433892 CCNHP51946 323 aaPredicted RBP12.1□□□□□ -0.47
CD44-209ENST00000433892 LILRA4P59901 499 aa12.1□□□□□ -0.47
CD44-209ENST00000433892 DEUP1Q05D60 604 aa12.1□□□□□ -0.47
CD44-209ENST00000433892 NAB1Q13506 487 aa12.1□□□□□ -0.47
CD44-209ENST00000433892 ZRSR2Q15696 482 aaKnown RBP12.1□□□□□ -0.47
CD44-209ENST00000433892 RALGPS1Q5JS13 557 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms