RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 ILKQ13418 452 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 GEN1Q17RS7 908 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 MPPE1Q53F39 396 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 RNF219Q5W0B1 726 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 KIAA0895LQ68EN5 471 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 KLHDC10Q6PID8 442 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 PRICKLE2Q7Z3G6 844 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 GATAD2AQ86YP4 633 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 DENND1CQ8IV53 801 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 NELFCDQ8IXH7 590 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 EID2Q8N6I1 236 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 GOLGA5Q8TBA6 731 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 RNF139Q8WU17 664 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 BIRC7Q96CA5 298 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 NAF1Q96HR8 494 aaKnown RBP8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 ELF4Q99607 663 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 OMDQ99983 421 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 BACH2Q9BYV9 841 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 SUN2Q9UH99 717 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 NUDT5Q9UKK9 219 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 SCML1Q9UN30 329 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 CLCA2Q9UQC9 943 aa8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 TP53BP1Q12888 1972 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-207ENST00000430841 MYO18BQ8IUG5 2567 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 HECTD1Q9ULT8 2610 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 PTPRQQ9UMZ3 2332 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 A0A1B0GTQ1 180 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 SLC12A8A0AV02 714 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 VILLO15195 856 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 CLIC2O15247 247 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 SLC28A2O43868 658 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 STC2O76061 302 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 PENKP01210 267 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 CISD3P0C7P0 127 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 PDCP20941 246 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 CD38P28907 300 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 CTSKP43235 329 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 NDST1P52848 882 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 COPAP53621 1224 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 SNRPFP62306 86 aaKnown RBP8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 BNC1Q01954 994 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 CEBPZQ03701 1054 aaKnown RBP8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 GRIN1Q05586 938 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 DNAJC3Q13217 504 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 RABEP1Q15276 862 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 TBC1D25Q3MII6 688 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 FAM26FQ5R3K3 315 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 KDM7AQ6ZMT4 941 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 DBX2Q6ZNG2 339 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 Q6ZVU0 165 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 CHST9Q7L1S5 443 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 UNC93AQ86WB7 457 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 SPACA3Q8IXA5 215 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 FUKQ8N0W3 1084 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 AHI1Q8N157 1196 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 PDILTQ8N807 584 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 FAM181AQ8N9Y4 354 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 SORCS1Q8WY21 1168 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 WBP2Q969T9 261 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 PLD4Q96BZ4 506 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 DNAJC19Q96DA6 116 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 MRRFQ96E11 262 aaKnown RBP8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 STRA6Q9BX79 667 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 PANK2Q9BZ23 570 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 CD248Q9HCU0 757 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 PNPLA8Q9NP80 782 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 AGPAT3Q9NRZ7 376 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 IGSF5Q9NSI5 407 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 OLA1Q9NTK5 396 aaKnown RBP8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 TMEM30AQ9NV96 361 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 MARCH2Q9P0N8 246 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 CGNQ9P2M7 1197 aaKnown RBP8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 ADAMTS1Q9UHI8 967 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 HCN2Q9UL51 889 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 TPX2Q9ULW0 747 aaKnown RBP8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 COL5A1P20908 1838 aaPredicted RBP8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 KNL1Q8NG31 2342 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 SPTA1P02549 2419 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 CKAP5Q14008 2032 aa8.19□□□□□ -1.1
ECHDC1-207ENST00000430841 KNTC1P50748 2209 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 FAM92AA1XBS5 289 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 CDC14CA4D256 554 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 PAPSS1O43252 624 aaPredicted RBP8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 TLX3O43711 291 aaPredicted RBP8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 RNASEH2AO75792 299 aaKnown RBP8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 MOCS3O95396 460 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 CST3P01034 146 aaPredicted RBP8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 ALPPL2P10696 532 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 CTSOP43234 321 aaPredicted RBP8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 SERPINB4P48594 390 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 ACADVLP49748 655 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 CLDN10P78369 228 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 E2F1Q01094 437 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 TLE3Q04726 772 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 CAMK2GQ13555 558 aaPredicted RBP8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 RTP5Q14D33 572 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 SGSM1Q2NKQ1 1148 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 SGO2Q562F6 1265 aa8.18□□□□□ -1.1
ECHDC1-207ENST00000430841 ARHGAP40Q5TG30 622 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms