RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 ABCB6Q9NP58 842 aa10.56□□□□□ -0.72
ATG4B-211ENST00000429899 NLRC4Q9NPP4 1024 aa10.56□□□□□ -0.72
ATG4B-211ENST00000429899 ITM2CQ9NQX7 267 aa10.56□□□□□ -0.72
ATG4B-211ENST00000429899 GTF3C4Q9UKN8 822 aa10.56□□□□□ -0.72
ATG4B-211ENST00000429899 MAN2B2Q9Y2E5 1009 aa10.56□□□□□ -0.72
ATG4B-211ENST00000429899 LUC7L2Q9Y383 392 aaKnown RBP10.56□□□□□ -0.72
ATG4B-211ENST00000429899 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.56□□□□□ -0.72
ATG4B-211ENST00000429899 NYNRINQ9P2P1 1898 aaKnown RBP10.55□□□□□ -0.72
ATG4B-211ENST00000429899 HOXC11O43248 304 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-211ENST00000429899 SUV39H1O43463 412 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 C1SP09871 688 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 CDK4P11802 303 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 ACADVLP49748 655 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 TAF6P49848 677 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 AFF3P51826 1226 aaKnown RBP10.55□□□□□ -0.72
ATG4B-211ENST00000429899 NOP14P78316 857 aaKnown RBP10.55□□□□□ -0.72
ATG4B-211ENST00000429899 TSPY1Q01534 308 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 GCNT1Q02742 428 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 FUT11Q495W5 492 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 HGSNATQ68CP4 663 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 KDM7AQ6ZMT4 941 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 METTL3Q86U44 580 aaKnown RBP10.55□□□□□ -0.72
ATG4B-211ENST00000429899 TMEM25Q86YD3 366 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 UBR7Q8N806 425 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 KIAA1958Q8N8K9 716 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 OR8K1Q8NGG5 319 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 SYN2Q92777 582 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-211ENST00000429899 KAT5Q92993 513 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 IGSF8Q969P0 613 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 TRIM44Q96DX7 344 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-211ENST00000429899 HIC2Q96JB3 615 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 ZNF578Q96N58 590 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-211ENST00000429899 NT5C1BQ96P26 610 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 VRTNQ9H8Y1 702 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 DNAJC12Q9UKB3 198 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 ITGA11Q9UKX5 1188 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 PYCARDQ9ULZ3 195 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 CLCA2Q9UQC9 943 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 ZKSCAN5Q9Y2L8 839 aa10.55□□□□□ -0.72
ATG4B-211ENST00000429899 BLACEA4D250 179 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 ZNF840PA6NDX5 716 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 KPNA7A9QM74 516 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 PAPSS1O43252 624 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-211ENST00000429899 STAU1O95793 577 aaKnown RBP10.54□□□□□ -0.72
ATG4B-211ENST00000429899 OAS1P00973 400 aaKnown RBP10.54□□□□□ -0.72
ATG4B-211ENST00000429899 ITGB3P05106 788 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 PNMA6AP0CW24 399 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-211ENST00000429899 PFKLP17858 780 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 PAX3P23760 479 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 PDE6CP51160 858 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 MYL6P60660 151 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 CDK17Q00537 523 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 TLE1Q04724 770 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 RAPGEF1Q13905 1077 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 TEAD4Q15561 434 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 ANO4Q32M45 955 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 INTS6LQ5JSJ4 861 aaKnown RBP10.54□□□□□ -0.72
ATG4B-211ENST00000429899 PRAMEF14Q5SWL7 426 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 BTBD8Q5XKL5 378 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 SPOPLQ6IQ16 392 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 RRAGAQ7L523 313 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 PDCL2Q8N4E4 241 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 SHC3Q92529 594 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 WBP2Q969T9 261 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 ELMO3Q96BJ8 720 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 PSMG3-AS1Q96PY0 264 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 BAG1Q99933 345 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-211ENST00000429899 STK33Q9BYT3 514 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 NUCKS1Q9H1E3 243 aaKnown RBP10.54□□□□□ -0.72
ATG4B-211ENST00000429899 C6orf106Q9H6K1 298 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-211ENST00000429899 TM9SF3Q9HD45 589 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 DDX43Q9NXZ2 648 aaKnown RBP10.54□□□□□ -0.72
ATG4B-211ENST00000429899 AIPL1Q9NZN9 384 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 TRPM5Q9NZQ8 1165 aa10.54□□□□□ -0.72
ATG4B-211ENST00000429899 SOWAHDA6NJG2 315 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 K7ENP7 123 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 PHACTR2O75167 634 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 ABL1P00519 1130 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 CST3P01034 146 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-211ENST00000429899 MPOP05164 745 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 SKILP12757 684 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 ACO1P21399 889 aaKnown RBP10.53□□□□□ -0.72
ATG4B-211ENST00000429899 POLR2BP30876 1174 aaKnown RBP10.53□□□□□ -0.72
ATG4B-211ENST00000429899 PRKCIP41743 596 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 CTSKP43235 329 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 ASPAP45381 313 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 CUL2Q13617 745 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 DRAP1Q14919 205 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-211ENST00000429899 ZNF699Q32M78 642 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 CFAP221Q4G0U5 840 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 SMYD5Q6GMV2 418 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 GRAMD4Q6IC98 578 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 INO80CQ6PI98 192 aaPredicted RBP10.53□□□□□ -0.72
ATG4B-211ENST00000429899 RAD9BQ6WBX8 426 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 NUDT18Q6ZVK8 323 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 ENOSF1Q7L5Y1 443 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 OSTM1Q86WC4 334 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 CACUL1Q86Y37 369 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 BBS7Q8IWZ6 715 aa10.53□□□□□ -0.72
ATG4B-211ENST00000429899 PPM1KQ8N3J5 372 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms