RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 RUBCNQ92622 972 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 TIFAQ96CG3 184 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 LRRC1Q9BTT6 524 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 GPR88Q9GZN0 384 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 C20orf96Q9NUD7 363 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-207ENST00000429896 PCDHA3Q9Y5H8 950 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 COL4A5P29400 1685 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 CHEK2O96017 543 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 SERPINF2P08697 491 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 AIF1P55008 147 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 UGP2Q16851 508 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 THEMIS2Q5TEJ8 643 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 AGMOQ6ZNB7 445 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 LPCAT1Q8NF37 534 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 L2HGDHQ9H9P8 463 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 PLAAQ9Y263 795 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 A0A1B0GUL6 1792 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 PMM2O15305 246 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 ESRRAP11474 423 aaPredicted RBP13.24□□□□□ -0.29
PTCH1-207ENST00000429896 TMPRSS15P98073 1019 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 SLC25A52Q3SY17 297 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 COG1Q8WTW3 980 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 LZICQ8WZA0 190 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 ZNF333Q96JL9 665 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 RBM15Q96T37 977 aaKnown RBP eCLIP13.24□□□□□ -0.29
PTCH1-207ENST00000429896 ELAC2Q9BQ52 826 aaKnown RBP13.24□□□□□ -0.29
PTCH1-207ENST00000429896 B3GNT5Q9BYG0 378 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 HACD1B0YJ81 288 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 HAS3O00219 553 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 PPEF2O14830 753 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 FSHRP23945 695 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 SGCGQ13326 291 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 MPPE1Q53F39 396 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 ARHGAP17Q68EM7 881 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 SMAD5Q99717 465 aaKnown RBP13.24□□□□□ -0.29
PTCH1-207ENST00000429896 FAXCQ5TGI0 409 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 XYLT1Q86Y38 959 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 ZNF280BQ86YH2 543 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 TAGAPQ8N103 731 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 CCDC90BQ9GZT6 254 aa13.24□□□□□ -0.29
PTCH1-207ENST00000429896 DDX60LQ5H9U9 1706 aaKnown RBP13.24□□□□□ -0.29
PTCH1-207ENST00000429896 PJA2O43164 708 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 APODP05090 189 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 CORO1AP31146 461 aaKnown RBP13.23□□□□□ -0.29
PTCH1-207ENST00000429896 ZC3H12BQ5HYM0 836 aaKnown RBP13.23□□□□□ -0.29
PTCH1-207ENST00000429896 RGS9BPQ6ZS82 235 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 IRF2BP2Q7Z5L9 587 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 COMMD8Q9NX08 183 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 DUS2Q9NX74 493 aaKnown RBP13.23□□□□□ -0.29
PTCH1-207ENST00000429896 GDAP2Q9NXN4 497 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 KIF17Q9P2E2 1029 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 SEPT3Q9UH03 358 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 COL4A1P02462 1669 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 CRTAMO95727 393 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 PDAP1Q13442 181 aaKnown RBP13.23□□□□□ -0.29
PTCH1-207ENST00000429896 TAF11Q15544 211 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 PTRHD1Q6GMV3 140 aaKnown RBP13.23□□□□□ -0.29
PTCH1-207ENST00000429896 BTN2A3PQ96KV6 586 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 FOXP3Q9BZS1 431 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 DNAJB4Q9UDY4 337 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 ZMYM5Q9UJ78 669 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 MSI1O43347 362 aaKnown RBP13.23□□□□□ -0.29
PTCH1-207ENST00000429896 KDELR1P24390 212 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 MAP4P27816 1152 aaKnown RBP13.23□□□□□ -0.29
PTCH1-207ENST00000429896 LRRC26Q2I0M4 334 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 PTPN20Q4JDL3 420 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 SERPINA13PQ6UXR4 307 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 KATNAL2Q8IYT4 538 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 TMEM40Q8WWA1 233 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 EPC1Q9H2F5 836 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 ZFP14Q9HCL3 533 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 PPARGC1AQ9UBK2 798 aaKnown RBP13.23□□□□□ -0.29
PTCH1-207ENST00000429896 TRHDEQ9UKU6 1024 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 CYP2A6P11509 494 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-207ENST00000429896 ITGA8P53708 1063 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 UBE3AQ05086 875 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 BCL2L1Q07817 233 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 CCNG2Q16589 344 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 GRAMD4Q6IC98 578 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 SNRNP25Q9BV90 132 aaKnown RBP13.23□□□□□ -0.29
PTCH1-207ENST00000429896 NEUROG2Q9H2A3 272 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 ZDHHC6Q9H6R6 413 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 COQ4Q9Y3A0 265 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 INPPL1O15357 1258 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 CYP4F8P98187 520 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 FAM126BQ8IXS8 530 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 TSPAN17Q96FV3 270 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 CPXM1Q96SM3 734 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 KIAA1522Q9P206 1035 aaPredicted RBP13.23□□□□□ -0.29
PTCH1-207ENST00000429896 NCANO14594 1321 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 MDM4O15151 490 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 RARAP10276 462 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 MMP13P45452 471 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 UPP1Q16831 310 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 MFSD7Q6UXD7 560 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 METTL3Q86U44 580 aaKnown RBP13.23□□□□□ -0.29
PTCH1-207ENST00000429896 HTR3CQ8WXA8 447 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 TEKT2Q9UIF3 430 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 DCTN4Q9UJW0 460 aa13.23□□□□□ -0.29
PTCH1-207ENST00000429896 VPS9D1Q9Y2B5 631 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms