RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 MROH9Q5TGP6 573 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 CDHR3Q6ZTQ4 885 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 C10orf82Q8WW14 230 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 AGAP3Q96P47 875 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 USH1CQ9Y6N9 552 aa16.67■□□□□ 0.26
MBD4-203ENST00000429544 RFPL1O75677 317 aa16.66■□□□□ 0.26
MBD4-203ENST00000429544 OR4Q2P0C623 313 aa16.66■□□□□ 0.26
MBD4-203ENST00000429544 NEFHP12036 1026 aa16.66■□□□□ 0.26
MBD4-203ENST00000429544 BNIP1Q12981 228 aa16.66■□□□□ 0.26
MBD4-203ENST00000429544 MAPRE1Q15691 268 aaKnown RBP16.66■□□□□ 0.26
MBD4-203ENST00000429544 SMAD1Q15797 465 aaKnown RBP16.66■□□□□ 0.26
MBD4-203ENST00000429544 SPATA2LQ8IUW3 424 aaPredicted RBP16.66■□□□□ 0.26
MBD4-203ENST00000429544 ARNTL2Q8WYA1 636 aa16.66■□□□□ 0.26
MBD4-203ENST00000429544 GORASP1Q9BQQ3 440 aa16.66■□□□□ 0.26
MBD4-203ENST00000429544 TRPV6Q9H1D0 765 aa16.66■□□□□ 0.26
MBD4-203ENST00000429544 NPHS2Q9NP85 383 aa16.66■□□□□ 0.26
MBD4-203ENST00000429544 HTTP42858 3142 aa16.66■□□□□ 0.26
MBD4-203ENST00000429544 CKBP12277 381 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 PGAM1P18669 254 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 TYMPP19971 482 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 CCNFP41002 786 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 YWHAHQ04917 246 aaPredicted RBP16.65■□□□□ 0.26
MBD4-203ENST00000429544 OVGP1Q12889 678 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 FYB2Q5VWT5 728 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 RTN4RL1Q86UN2 441 aaPredicted RBP16.65■□□□□ 0.26
MBD4-203ENST00000429544 CHSY1Q86X52 802 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 ZNF280BQ86YH2 543 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 SCML4Q8N228 414 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 MTBPQ96DY7 904 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 PCMTD2Q9NV79 361 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 PCDHB8Q9UN66 801 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 HMX2A2RU54 273 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 NCAM2O15394 837 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 BGNP21810 368 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 PAX3P23760 479 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 GRIK1P39086 918 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 SERPINB9P50453 376 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 SLC5A3P53794 718 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 GALNT2Q10471 571 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 CRYMQ14894 314 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 GLB1LQ6UWU2 654 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 HDAC11Q96DB2 347 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 CELF6Q96J87 481 aaKnown RBP16.65■□□□□ 0.26
MBD4-203ENST00000429544 SLC13A1Q9BZW2 595 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 MYLK2Q9H1R3 596 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 RGS18Q9NS28 235 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 KLC4Q9NSK0 619 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 TTC3P53804 2025 aa16.65■□□□□ 0.26
MBD4-203ENST00000429544 ARHGEF37A1IGU5 675 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 ZBTB24O43167 697 aaPredicted RBP16.64■□□□□ 0.26
MBD4-203ENST00000429544 USP12O75317 370 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 CABYRO75952 493 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 DDHD2O94830 711 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 MX2P20592 715 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 SERPINB6P35237 376 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 GARSP41250 739 aaKnown RBP16.64■□□□□ 0.26
MBD4-203ENST00000429544 SERPINB4P48594 390 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 CCDC15Q0P6D6 951 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 ZBTB17Q13105 803 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 MBTPS1Q14703 1052 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 CLLU1OSQ5K130 101 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 CYB5D1Q6P9G0 228 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 MARK2Q7KZI7 788 aaKnown RBP16.64■□□□□ 0.26
MBD4-203ENST00000429544 TBC1D1Q86TI0 1168 aaPredicted RBP16.64■□□□□ 0.26
MBD4-203ENST00000429544 OR52K1Q8NGK4 314 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 LINC01599Q8WXQ3 324 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 PGLYRP2Q96PD5 576 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 TSSK1BQ9BXA7 367 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 SIK2Q9H0K1 926 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 CHKBQ9Y259 395 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 SQORQ9Y6N5 450 aa16.64■□□□□ 0.26
MBD4-203ENST00000429544 INPPL1O15357 1258 aa16.64■□□□□ 0.25
MBD4-203ENST00000429544 ALDH1A2O94788 518 aa16.64■□□□□ 0.25
MBD4-203ENST00000429544 SRGAP2BP0DMP2 458 aa16.64■□□□□ 0.25
MBD4-203ENST00000429544 PGFP49763 221 aa16.64■□□□□ 0.25
MBD4-203ENST00000429544 ZNF135P52742 658 aaPredicted RBP16.64■□□□□ 0.25
MBD4-203ENST00000429544 SLC20A2Q08357 652 aa16.64■□□□□ 0.25
MBD4-203ENST00000429544 NIPAL4Q0D2K0 466 aa16.64■□□□□ 0.25
MBD4-203ENST00000429544 SLC39A12Q504Y0 691 aa16.64■□□□□ 0.25
MBD4-203ENST00000429544 RWDD4Q6NW29 188 aaKnown RBP16.64■□□□□ 0.25
MBD4-203ENST00000429544 CES3Q6UWW8 571 aa16.64■□□□□ 0.25
MBD4-203ENST00000429544 C4orf50Q6ZRC1 276 aa16.64■□□□□ 0.25
MBD4-203ENST00000429544 APBB2Q92870 758 aa16.64■□□□□ 0.25
MBD4-203ENST00000429544 IRAK2O43187 625 aa16.63■□□□□ 0.25
MBD4-203ENST00000429544 ZNF189O75820 626 aaPredicted RBP16.63■□□□□ 0.25
MBD4-203ENST00000429544 IGLV3-25P01717 112 aa16.63■□□□□ 0.25
MBD4-203ENST00000429544 TROVE2P10155 538 aaKnown RBP eCLIP16.63■□□□□ 0.25
MBD4-203ENST00000429544 CD68P34810 354 aaPredicted RBP16.63■□□□□ 0.25
MBD4-203ENST00000429544 SETDB1Q15047 1291 aa16.63■□□□□ 0.25
MBD4-203ENST00000429544 BTBD8Q5XKL5 378 aa16.63■□□□□ 0.25
MBD4-203ENST00000429544 CYS1Q717R9 158 aa16.63■□□□□ 0.25
MBD4-203ENST00000429544 SCN4BQ8IWT1 228 aa16.63■□□□□ 0.25
MBD4-203ENST00000429544 STKLD1Q8NE28 680 aa16.63■□□□□ 0.25
MBD4-203ENST00000429544 ERP27Q96DN0 273 aa16.63■□□□□ 0.25
MBD4-203ENST00000429544 HHIPL1Q96JK4 782 aa16.63■□□□□ 0.25
MBD4-203ENST00000429544 TRIM62Q9BVG3 475 aa16.63■□□□□ 0.25
MBD4-203ENST00000429544 BRD8Q9H0E9 1235 aa16.63■□□□□ 0.25
MBD4-203ENST00000429544 GBA3Q9H227 469 aa16.63■□□□□ 0.25
MBD4-203ENST00000429544 IL1RAPL1Q9NZN1 696 aa16.63■□□□□ 0.25
MBD4-203ENST00000429544 SRRDQ9UH36 339 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms