RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ADORA2AP29274 412 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 ZNF132P52740 706 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 SLC6A3Q01959 620 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 DEUP1Q05D60 604 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 PPIL2Q13356 520 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 PDK2Q15119 407 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 DLG2Q15700 870 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 FXNQ16595 210 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 CELF3Q5SZQ8 465 aaKnown RBP8.27□□□□□ -1.09
HPS4-205ENST00000429411 CTU1Q7Z7A3 348 aaKnown RBP8.27□□□□□ -1.09
HPS4-205ENST00000429411 SPATA24Q86W54 205 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 CMASQ8NFW8 434 aaPredicted RBP8.27□□□□□ -1.09
HPS4-205ENST00000429411 TBCBQ99426 244 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 MUC3BQ9H195 1237 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 PAPOLBQ9NRJ5 636 aaKnown RBP8.27□□□□□ -1.09
HPS4-205ENST00000429411 ADA2Q9NZK5 511 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 LRCH1Q9Y2L9 728 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 TEX264Q9Y6I9 313 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 STYXL1Q9Y6J8 313 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 SLC15A5A6NIM6 579 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 C2CD4BA6NLJ0 364 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 H3BRB1 525 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 DFFAO00273 331 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 EEF2KO00418 725 aaKnown RBP8.27□□□□□ -1.09
HPS4-205ENST00000429411 CA12O43570 354 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 B4GALT4O60513 344 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 DNAJC6O75061 913 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 SMNDC1O75940 238 aaKnown RBP eCLIP8.27□□□□□ -1.09
HPS4-205ENST00000429411 CD53P19397 219 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 PKNOX1P55347 436 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 ART3Q13508 389 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 PRKD1Q15139 912 aaPredicted RBP8.27□□□□□ -1.09
HPS4-205ENST00000429411 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.27□□□□□ -1.09
HPS4-205ENST00000429411 DNAL1Q4LDG9 190 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 PRAMEF19Q5SWL8 479 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 PDPK2PQ6A1A2 396 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 RAB3IL1Q8TBN0 382 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 PPWD1Q96BP3 646 aaKnown RBP8.27□□□□□ -1.09
HPS4-205ENST00000429411 ZNF184Q99676 751 aaPredicted RBP8.27□□□□□ -1.09
HPS4-205ENST00000429411 EBNA1BP2Q99848 306 aaKnown RBP8.27□□□□□ -1.09
HPS4-205ENST00000429411 VCX3BQ9H321 246 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 TUT1Q9H6E5 874 aaKnown RBP8.27□□□□□ -1.09
HPS4-205ENST00000429411 XPNPEP3Q9NQH7 507 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 ADGRA2Q96PE1 1338 aa8.27□□□□□ -1.09
HPS4-205ENST00000429411 FAM155AB1AL88 458 aaPredicted RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 AP1G2O75843 785 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 POLBP06746 335 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 DLDP09622 509 aaKnown RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 HSPA8P11142 646 aaKnown RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 TGM2P21980 687 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 ATN1P54259 1190 aaPredicted RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 SH3BGRP55822 239 aaPredicted RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 MAP3K7CLP57077 242 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 TPI1P60174 286 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 DSG1Q02413 1049 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 PRKCZQ05513 592 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 RBBP5Q15291 538 aaKnown RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 MAP7D1Q3KQU3 841 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 LBX2Q6XYB7 198 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 PTAR1Q7Z6K3 402 aaPredicted RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 PIWIL2Q8TC59 973 aaKnown RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 TMEM106CQ9BVX2 250 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 DNAI2Q9GZS0 605 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 MCOLN1Q9GZU1 580 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 LHX5Q9H2C1 402 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 PRDM12Q9H4Q4 367 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 WDR55Q9H6Y2 383 aaPredicted RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 CYP4F12Q9HCS2 524 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 IARS2Q9NSE4 1012 aaKnown RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 SYBUQ9NX95 663 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.26□□□□□ -1.09
HPS4-205ENST00000429411 KANSL3Q9P2N6 904 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 NUDT5Q9UKK9 219 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 TNFSF13BQ9Y275 285 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 MAGEB2O15479 319 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 SORBS2O94875 1100 aaKnown RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 PIGRP01833 764 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 LGALS2P05162 132 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 NCAM1P13591 858 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 CPA3P15088 417 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 ANPEPP15144 967 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 LMO2P25791 158 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 CLDN10P78369 228 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 MBTD1Q05BQ5 628 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 MED21Q13503 144 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 USP10Q14694 798 aaKnown RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 PCSK7Q16549 785 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 UBE2Q1Q7Z7E8 422 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 LCA5Q86VQ0 697 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 HPS6Q86YV9 775 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 MS4A4AQ96JQ5 239 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 GCNAQ96QF7 691 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 NXF3Q9H4D5 531 aaKnown RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 POPDC2Q9HBU9 364 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 TXNRD2Q9NNW7 524 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 THAP1Q9NVV9 213 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 TMCC3Q9ULS5 477 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 SOX13Q9UN79 622 aa8.26□□□□□ -1.09
HPS4-205ENST00000429411 HBS1LQ9Y450 684 aaKnown RBP8.26□□□□□ -1.09
HPS4-205ENST00000429411 PSAT1Q9Y617 370 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms