RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 CRHR1P34998 444 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 GRIA2P42262 883 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 METTL7BQ6UX53 244 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 ZNF534Q76KX8 674 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 CDKL3Q8IVW4 592 aaPredicted RBP12.8□□□□□ -0.36
CDH3-202ENST00000429102 PPP2R3CQ969Q6 453 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 P2RY11Q96G91 374 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 SIK2Q9H0K1 926 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 C20orf96Q9NUD7 363 aaPredicted RBP12.8□□□□□ -0.36
CDH3-202ENST00000429102 MAP3K20Q9NYL2 800 aaKnown RBP12.8□□□□□ -0.36
CDH3-202ENST00000429102 ASB3Q9Y575 518 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 GREB1LQ9C091 1923 aaPredicted RBP12.8□□□□□ -0.36
CDH3-202ENST00000429102 A0A096LPK6 155 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 RPL10P27635 214 aaKnown RBP12.8□□□□□ -0.36
CDH3-202ENST00000429102 PRAMEP78395 509 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 PCLAFQ15004 111 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 ZNF280DQ6N043 979 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 XRRA1Q6P2D8 792 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 DEFB106AQ8N104 65 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 SLC2A14Q8TDB8 520 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 NPAS2Q99743 824 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 NIFKQ9BYG3 293 aaKnown RBP12.8□□□□□ -0.36
CDH3-202ENST00000429102 CHRAC1Q9NRG0 131 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 SNX15Q9NRS6 342 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 PDP2Q9P2J9 529 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 PCDHA11Q9Y5I1 949 aa12.8□□□□□ -0.36
CDH3-202ENST00000429102 SPAG6O75602 509 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 SEC24DO94855 1032 aaPredicted RBP12.79□□□□□ -0.36
CDH3-202ENST00000429102 PIGRP01833 764 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 SRGAP2BP0DMP2 458 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 ITGAXP20702 1163 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 ABCE1P61221 599 aaKnown RBP12.79□□□□□ -0.36
CDH3-202ENST00000429102 SLC6A3Q01959 620 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 ART3Q13508 389 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 TARBP2Q15633 366 aaKnown RBP12.79□□□□□ -0.36
CDH3-202ENST00000429102 MBLAC2Q68D91 279 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.79□□□□□ -0.36
CDH3-202ENST00000429102 TDRD5Q8NAT2 981 aaKnown RBP12.79□□□□□ -0.36
CDH3-202ENST00000429102 MCUQ8NE86 351 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 RCN3Q96D15 328 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 MED10Q9BTT4 135 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 PTPRHQ9HD43 1115 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 FOCADQ5VW36 1801 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 M0QYT0 321 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 HNRNPRO43390 633 aaKnown RBP12.79□□□□□ -0.36
CDH3-202ENST00000429102 ONECUT3O60422 494 aaPredicted RBP12.79□□□□□ -0.36
CDH3-202ENST00000429102 COX4I1P13073 169 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 ETFBP38117 255 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 RAP1GDS1P52306 607 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 FLOT2Q14254 428 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 SURF1Q15526 300 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 RBM44Q6ZP01 1051 aaKnown RBP12.79□□□□□ -0.36
CDH3-202ENST00000429102 MFN1Q8IWA4 741 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 DIS3LQ8TF46 1054 aaKnown RBP12.79□□□□□ -0.36
CDH3-202ENST00000429102 RNF34Q969K3 372 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 PPWD1Q96BP3 646 aaKnown RBP12.79□□□□□ -0.36
CDH3-202ENST00000429102 ANKRD27Q96NW4 1050 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 GPR20Q99678 358 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 APBA2Q99767 749 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 GORASP1Q9BQQ3 440 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 GTSE1Q9NYZ3 720 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 SERPINE1P05121 402 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 CPOXP36551 454 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 RBP5P82980 135 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 PITRM1Q5JRX3 1037 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 FBXL19Q6PCT2 694 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 MARK2Q7KZI7 788 aaKnown RBP12.79□□□□□ -0.36
CDH3-202ENST00000429102 FNIP1Q8TF40 1166 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 EDEM1Q92611 657 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 FCRL3Q96P31 734 aaPredicted RBP12.79□□□□□ -0.36
CDH3-202ENST00000429102 SPATA16Q9BXB7 569 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 COPG2Q9UBF2 871 aa12.79□□□□□ -0.36
CDH3-202ENST00000429102 B4GALT4O60513 344 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 JUNP05412 331 aaKnown RBP12.78□□□□□ -0.36
CDH3-202ENST00000429102 PFKMP08237 780 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 XRCC1P18887 633 aaPredicted RBP12.78□□□□□ -0.36
CDH3-202ENST00000429102 TGM2P21980 687 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 IGFBP6P24592 240 aaPredicted RBP12.78□□□□□ -0.36
CDH3-202ENST00000429102 PRKCHP24723 683 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 L1CAMP32004 1257 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 CXCR3P49682 368 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 MBTD1Q05BQ5 628 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 ADIGQ0VDE8 80 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 MSLNQ13421 630 aaPredicted RBP12.78□□□□□ -0.36
CDH3-202ENST00000429102 MTHFD1LQ6UB35 978 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 HIC2Q96JB3 615 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 MMADHCQ9H3L0 296 aaPredicted RBP12.78□□□□□ -0.36
CDH3-202ENST00000429102 SUDS3Q9H7L9 328 aaPredicted RBP12.78□□□□□ -0.36
CDH3-202ENST00000429102 ATP6AP2A0A1C7CYW4 349 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 NEMP2A6NFY4 417 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 KIF3CO14782 793 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 GLRA3O75311 464 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 ATP6AP2O75787 350 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 GABBR2O75899 941 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 KLHL2O95198 593 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 GSTA2P09210 222 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 HNRNPLP14866 589 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDH3-202ENST00000429102 CDH5P33151 784 aaPredicted RBP12.78□□□□□ -0.36
CDH3-202ENST00000429102 PTPN7P35236 360 aa12.78□□□□□ -0.36
CDH3-202ENST00000429102 ALDH1A3P47895 512 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms