RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 PDE1BQ01064 536 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 MRPL58Q14197 206 aaKnown RBP11.76□□□□□ -0.53
CECR3-201ENST00000428828 GOLGA7BQ2TAP0 167 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 CFAP157Q5JU67 520 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 PHLDB2Q86SQ0 1253 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 LRRTM3Q86VH5 581 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 MAP7D3Q8IWC1 876 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 NUP93Q8N1F7 819 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 SPATA18Q8TC71 538 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 SLC2A14Q8TDB8 520 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 ZNF606Q8WXB4 792 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 MYLPFQ96A32 169 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 ITPKCQ96DU7 683 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 ECSITQ9BQ95 431 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 PACSIN1Q9BY11 444 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 CADM1Q9BY67 442 aaKnown RBP11.76□□□□□ -0.53
CECR3-201ENST00000428828 DNAI2Q9GZS0 605 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 FAM124BQ9H5Z6 455 aaPredicted RBP11.76□□□□□ -0.53
CECR3-201ENST00000428828 ADAMTS1Q9UHI8 967 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 AMFRQ9UKV5 643 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 PCDHA3Q9Y5H8 950 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 ZNF638Q14966 1978 aaKnown RBP11.76□□□□□ -0.53
CECR3-201ENST00000428828 GREB1Q4ZG55 1949 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 KANSL1LA0AUZ9 987 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 TMEM247A6NEH6 219 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 M0QYV0 167 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 RFXAPO00287 272 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 FGGP02679 453 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 RB1P06400 928 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 SPATA31D3P0C874 917 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 CTSAP10619 480 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 BRAFP15056 766 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 OR1D2P34982 312 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 EMP3P54852 163 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 NR1H3Q13133 447 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 CTC1Q2NKJ3 1217 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 P3H1Q32P28 736 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 PDCD4Q53EL6 469 aaKnown RBP11.76□□□□□ -0.53
CECR3-201ENST00000428828 HSP90AA5PQ58FG0 334 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 FAM91A1Q658Y4 838 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 DUS1LQ6P1R4 473 aaKnown RBP11.76□□□□□ -0.53
CECR3-201ENST00000428828 SPATA31D4Q6ZUB0 917 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 SCUBE1Q8IWY4 988 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 CRYBG2Q8N1P7 616 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 RIBC1Q8N443 379 aaPredicted RBP11.76□□□□□ -0.53
CECR3-201ENST00000428828 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
CECR3-201ENST00000428828 ATP11CQ8NB49 1132 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 C10orf82Q8WW14 230 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 PCED1BQ96HM7 432 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 MPP4Q96JB8 637 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 AGPAT1Q99943 283 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 ABI2Q9NYB9 513 aaPredicted RBP11.76□□□□□ -0.53
CECR3-201ENST00000428828 MTRRQ9UBK8 725 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 NAGPAQ9UK23 515 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 TSPAN16Q9UKR8 245 aa11.76□□□□□ -0.53
CECR3-201ENST00000428828 OR6C75A6NL08 312 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 H3BNC9 293 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 GSC2O15499 205 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 TPD52L2O43399 206 aaKnown RBP11.75□□□□□ -0.53
CECR3-201ENST00000428828 MED7O43513 233 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 EDF1O60869 148 aaKnown RBP11.75□□□□□ -0.53
CECR3-201ENST00000428828 KRT36O76013 467 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 CXCL14O95715 111 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 UBTFL6P0CB48 400 aaPredicted RBP11.75□□□□□ -0.53
CECR3-201ENST00000428828 CHRNB2P17787 502 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 TNFAIP3P21580 790 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 HOXD12P35452 270 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 IRS1P35568 1242 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 SESN3P58005 492 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 FMO1Q01740 532 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 BCL2A1Q16548 175 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 PALB2Q86YC2 1186 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 SLC15A3Q8IY34 581 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 KBTBD2Q8IY47 623 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 ZBED8Q8IZ13 594 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 DCP1BQ8IZD4 617 aaKnown RBP11.75□□□□□ -0.53
CECR3-201ENST00000428828 UBA3Q8TBC4 463 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 DQX1Q8TE96 717 aaKnown RBP11.75□□□□□ -0.53
CECR3-201ENST00000428828 GAB3Q8WWW8 586 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 DDX1Q92499 740 aaKnown RBP11.75□□□□□ -0.53
CECR3-201ENST00000428828 MIPEPQ99797 713 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 CLSTN3Q9BQT9 956 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 B3GNT5Q9BYG0 378 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 ZNF518BQ9C0D4 1074 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 GPAMQ9HCL2 828 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 CYLDQ9NQC7 956 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 PLK2Q9NYY3 685 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 LZTS1Q9Y250 596 aa11.75□□□□□ -0.53
CECR3-201ENST00000428828 REV3LO60673 3130 aa11.74□□□□□ -0.53
CECR3-201ENST00000428828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.74□□□□□ -0.53
CECR3-201ENST00000428828 SMIM23A6NLE4 172 aa11.74□□□□□ -0.53
CECR3-201ENST00000428828 TMEM110-MUSTN1A8MSY1 372 aa11.74□□□□□ -0.53
CECR3-201ENST00000428828 HIDE1A8MVS5 230 aa11.74□□□□□ -0.53
CECR3-201ENST00000428828 DDX3YO15523 660 aaKnown RBP11.74□□□□□ -0.53
CECR3-201ENST00000428828 CBFA2T3O75081 653 aa11.74□□□□□ -0.53
CECR3-201ENST00000428828 MICAL2O94851 1124 aa11.74□□□□□ -0.53
CECR3-201ENST00000428828 ALOX15P16050 662 aaPredicted RBP11.74□□□□□ -0.53
CECR3-201ENST00000428828 ROR1Q01973 937 aa11.74□□□□□ -0.53
CECR3-201ENST00000428828 MPP2Q14168 576 aa11.74□□□□□ -0.53
CECR3-201ENST00000428828 KRT72Q14CN4 511 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms