RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ZFXP17010 805 aaPredicted RBP8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 RHOQP17081 205 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 ERCC2P18074 760 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 AMPD1P23109 780 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 IL4RP24394 825 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 HOXC13P31276 330 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 CHKAP35790 457 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 PAFAH1B1P43034 410 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 HCAR3P49019 387 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 SGSHP51688 502 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 TFF2Q03403 129 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 CDH18Q13634 790 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 HTR4Q13639 388 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 PDGFRLQ15198 375 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 TAZQ16635 292 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 WHAMMP3Q1A5X7 153 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 ANO4Q32M45 955 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 PUS10Q3MIT2 529 aaKnown RBP8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 ALFQ53S48 1182 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 C1orf228Q6PIY5 440 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 VITQ6UXI7 678 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 BBS12Q6ZW61 710 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 CCDC117Q8IWD4 279 aaPredicted RBP8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZNF683Q8IZ20 524 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 CPXM2Q8N436 756 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 RTL3Q8N8U3 475 aaKnown RBP8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 PCDH19Q8TAB3 1148 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 FAM71BQ8TC56 605 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 DDI1Q8WTU0 396 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 DEPDC1BQ8WUY9 529 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 OSCP1Q8WVF1 389 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 FGF14Q92915 247 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 ELSPBP1Q96BH3 223 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 FAF2Q96CS3 445 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 MYEOVQ96EZ4 313 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZFYVE19Q96K21 471 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 LRRC3BQ96PB8 259 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 RNF157Q96PX1 679 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 HERPUD2Q9BSE4 406 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 PRDM6Q9NQX0 595 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 CDC23Q9UJX2 597 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 STOML2Q9UJZ1 356 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 NEU3Q9UQ49 428 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 HEY1Q9Y5J3 304 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 MRFAP1Q9Y605 127 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 NUMBLQ9Y6R0 609 aa8.15□□□□□ -1.1
HMGA1P4-201ENST00000428643 CDH23Q9H251 3354 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 MTCL1Q9Y4B5 1905 aaKnown RBP8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 IGLV3-10A0A075B6K4 115 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 A0A1B0GVM2 712 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 TCRBV7S2A1N4TA0A589 114 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 TCAF2A6NFQ2 919 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 NEDD8-MDP1E9PL57 170 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 DFFAO00273 331 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 KRIT1O00522 736 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 DLL1O00548 723 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 DCLK1O15075 740 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 MFSD11O43934 449 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 CLDN11O75508 207 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 CNTN5O94779 1100 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 LUC7L3O95232 432 aaKnown RBP8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 MAP3K6O95382 1288 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 NFATC1O95644 943 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 CYP17A1P05093 508 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 ADH5P11766 374 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 IL9P15248 144 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 ARSAP15289 507 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 PECAM1P16284 738 aaPredicted RBP8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 PSMC3P17980 439 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 TGM2P21980 687 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 GDI1P31150 447 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 SERPINB6P35237 376 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 MAPKAPK2P49137 400 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 GBE1Q04446 702 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 TUBB2AQ13885 445 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 SMAD2Q15796 467 aaKnown RBP8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 MPPE1Q53F39 396 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 LY6G5CQ5SRR4 150 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 NCBP2-AS2Q69YL0 99 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 SLC9A4Q6AI14 798 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 TRIM68Q6AZZ1 485 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 CHST9Q7L1S5 443 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 CREG2Q8IUH2 290 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 MFN1Q8IWA4 741 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 MFSD6LQ8IWD5 586 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 FAM217AQ8IXS0 508 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 RASGEF1CQ8N431 466 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 CARNMT1Q8N4J0 409 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 CPA6Q8N4T0 437 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 CCDC33Q8N5R6 958 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 NPWQ8N729 165 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 PQLC3Q8N755 202 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 KIAA1958Q8N8K9 716 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 MNS1Q8NEH6 495 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 ACTRT1Q8TDG2 376 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 MAIP1Q8WWC4 291 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 ATG4AQ8WYN0 398 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 IRF7Q92985 503 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 ATP2A3Q93084 1043 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 OTUB2Q96DC9 234 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms