RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 NNTQ13423 1086 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 E2F5Q15329 346 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 ZC3H12AQ5D1E8 599 aaKnown RBP16.09■□□□□ 0.17
SEC13-210ENST00000428626 KCNT1Q5JUK3 1230 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 TRIM65Q6PJ69 517 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 RAB44Q7Z6P3 723 aaPredicted RBP16.09■□□□□ 0.17
SEC13-210ENST00000428626 TMEM110Q86TL2 294 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 CARNMT1Q8N4J0 409 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 PNPLA1Q8N8W4 532 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 STK32AQ8WU08 396 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 GOLGA1Q92805 767 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 BIRC7Q96CA5 298 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 SERPINB11Q96P15 392 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 GAREM1Q9H706 876 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 MSRB2Q9Y3D2 182 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 PLXNB3Q9ULL4 1909 aa16.09■□□□□ 0.17
SEC13-210ENST00000428626 THAP12O43422 761 aa16.08■□□□□ 0.16
SEC13-210ENST00000428626 SIN3BO75182 1162 aa16.08■□□□□ 0.16
SEC13-210ENST00000428626 SEMA4FO95754 770 aa16.08■□□□□ 0.16
SEC13-210ENST00000428626 TRIP6Q15654 476 aaKnown RBP16.08■□□□□ 0.16
SEC13-210ENST00000428626 CAMK4Q16566 473 aa16.08■□□□□ 0.16
SEC13-210ENST00000428626 HLA-BQ31612 363 aa16.08■□□□□ 0.16
SEC13-210ENST00000428626 RAP1GAP2Q684P5 730 aa16.08■□□□□ 0.16
SEC13-210ENST00000428626 BEND5Q7L4P6 421 aa16.08■□□□□ 0.16
SEC13-210ENST00000428626 APCDD1Q8J025 514 aa16.08■□□□□ 0.16
SEC13-210ENST00000428626 LGI2Q8N0V4 545 aa16.08■□□□□ 0.16
SEC13-210ENST00000428626 SNX19Q92543 992 aa16.08■□□□□ 0.16
SEC13-210ENST00000428626 ZDHHC5Q9C0B5 715 aa16.08■□□□□ 0.16
SEC13-210ENST00000428626 PCED1AQ9H1Q7 454 aa16.08■□□□□ 0.16
SEC13-210ENST00000428626 RSPH9Q9H1X1 276 aaPredicted RBP16.08■□□□□ 0.16
SEC13-210ENST00000428626 PCOLCE2Q9UKZ9 415 aa16.08■□□□□ 0.16
SEC13-210ENST00000428626 FAM221BA6H8Z2 402 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 TTC34A8MYJ7 566 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 LUC7L3O95232 432 aaKnown RBP16.07■□□□□ 0.16
SEC13-210ENST00000428626 TRUB2O95900 331 aaKnown RBP16.07■□□□□ 0.16
SEC13-210ENST00000428626 DNTTP04053 509 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 IGHV4-34P06331 123 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 FTH1P19P0C7X4 201 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 TACR2P21452 398 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 GNA15P30679 374 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 ACADSBP45954 432 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 PDCLQ13371 301 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 MEA1Q16626 185 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 KIF19Q2TAC6 998 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 HNRNPA1L2Q32P51 320 aaKnown RBP16.07■□□□□ 0.16
SEC13-210ENST00000428626 PITRM1Q5JRX3 1037 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 C9orf64Q5T6V5 341 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 ZNF776Q68DI1 518 aaPredicted RBP16.07■□□□□ 0.16
SEC13-210ENST00000428626 DBX2Q6ZNG2 339 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 SLCO6A1Q86UG4 719 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 CIR1Q86X95 450 aaPredicted RBP16.07■□□□□ 0.16
SEC13-210ENST00000428626 DHX40Q8IX18 779 aaKnown RBP16.07■□□□□ 0.16
SEC13-210ENST00000428626 CPXM1Q96SM3 734 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 PRMT1Q99873 361 aaKnown RBP16.07■□□□□ 0.16
SEC13-210ENST00000428626 BTBD1Q9H0C5 482 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 TM9SF3Q9HD45 589 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 TM7SF3Q9NS93 570 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 KIAA1468Q9P260 1216 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 SUN2Q9UH99 717 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 SLCO3A1Q9UIG8 710 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 RWDD2AQ9UIY3 292 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 ERVW-1Q9UQF0 538 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 SNX11Q9Y5W9 270 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 PLXNA2O75051 1894 aa16.07■□□□□ 0.16
SEC13-210ENST00000428626 NYNRINQ9P2P1 1898 aaKnown RBP16.07■□□□□ 0.16
SEC13-210ENST00000428626 DSPP15924 2871 aaKnown RBP16.06■□□□□ 0.16
SEC13-210ENST00000428626 ANKRD11Q6UB99 2663 aaPredicted RBP16.06■□□□□ 0.16
SEC13-210ENST00000428626 C10orf142B7Z368 130 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 KCNK3O14649 394 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 SART1O43290 800 aaKnown RBP16.06■□□□□ 0.16
SEC13-210ENST00000428626 FSBPO95073 299 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 CAPNS1P04632 268 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 MATKP42679 507 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 IRAK1P51617 712 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 YWHAZP63104 245 aaKnown RBP16.06■□□□□ 0.16
SEC13-210ENST00000428626 ZBTB16Q05516 673 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 CDH18Q13634 790 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 ARHGAP44Q17R89 818 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 PASD1Q8IV76 773 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 BAHD1Q8TBE0 780 aaPredicted RBP16.06■□□□□ 0.16
SEC13-210ENST00000428626 SHC3Q92529 594 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 FAM129BQ96TA1 746 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 DDX50Q9BQ39 737 aaKnown RBP16.06■□□□□ 0.16
SEC13-210ENST00000428626 PABPC3Q9H361 631 aaKnown RBP16.06■□□□□ 0.16
SEC13-210ENST00000428626 FBRSQ9HAH7 460 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 EBF2Q9HAK2 575 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 POPDC2Q9HBU9 364 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 SIX2Q9NPC8 291 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 TOR4AQ9NXH8 423 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 BTBD3Q9Y2F9 522 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 LAMA5O15230 3695 aa16.06■□□□□ 0.16
SEC13-210ENST00000428626 TP53BP1Q12888 1972 aaPredicted RBP16.06■□□□□ 0.16
SEC13-210ENST00000428626 SRRM3A6NNA2 597 aaPredicted RBP16.05■□□□□ 0.16
SEC13-210ENST00000428626 TAF4O00268 1085 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 CAPN9O14815 690 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 MID1O15344 667 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 MED7O43513 233 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 ASLP04424 464 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 ZNF883P0CG24 379 aa16.05■□□□□ 0.16
SEC13-210ENST00000428626 PNMA6AP0CW24 399 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms