RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 SLC6A3Q01959 620 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 SFSWAPQ12872 951 aaKnown RBP10.53□□□□□ -0.72
COMMD1-202ENST00000427417 EIF4EBP2Q13542 120 aaPredicted RBP10.53□□□□□ -0.72
COMMD1-202ENST00000427417 SLC12A1Q13621 1099 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 DRAP1Q14919 205 aaPredicted RBP10.53□□□□□ -0.72
COMMD1-202ENST00000427417 TAF5Q15542 800 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 PTPRNQ16849 979 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 UAP1L1Q3KQV9 507 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 TTC31Q49AM3 519 aaPredicted RBP10.53□□□□□ -0.72
COMMD1-202ENST00000427417 RABGAP1LQ5R372 815 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 RAP1GAP2Q684P5 730 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 SASS6Q6UVJ0 657 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 OLFML1Q6UWY5 402 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 FAM183BPQ6ZVS7 135 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 SLC26A9Q7LBE3 791 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 SLC41A1Q8IVJ1 513 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 LGI2Q8N0V4 545 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 KDM1BQ8NB78 822 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 MSANTD4Q8NCY6 345 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 ANKRD20A12PQ8NF67 263 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 ZNF397Q8NF99 534 aaPredicted RBP10.53□□□□□ -0.72
COMMD1-202ENST00000427417 WFDC5Q8TCV5 224 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 TTC17Q96AE7 1141 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 PPP1R9BQ96SB3 815 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 GPR174Q9BXC1 333 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 STK33Q9BYT3 514 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 PCED1AQ9H1Q7 454 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 AJAP1Q9UKB5 411 aaPredicted RBP10.53□□□□□ -0.72
COMMD1-202ENST00000427417 SCML1Q9UN30 329 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 DAAM1Q9Y4D1 1078 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 FHOD1Q9Y613 1164 aa10.53□□□□□ -0.72
COMMD1-202ENST00000427417 SYNJ2BP-COX16A0A087WUM0 186 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 RNASEH1O60930 286 aaKnown RBP10.52□□□□□ -0.73
COMMD1-202ENST00000427417 DAB1O75553 588 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 LSM8O95777 96 aaKnown RBP10.52□□□□□ -0.73
COMMD1-202ENST00000427417 ERBB2P04626 1255 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 SRPRAP08240 638 aaKnown RBP10.52□□□□□ -0.73
COMMD1-202ENST00000427417 PNMA6AP0CW24 399 aaPredicted RBP10.52□□□□□ -0.73
COMMD1-202ENST00000427417 C7P10643 843 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 CEACAM1P13688 526 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 CYP11B1P15538 503 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 CSRP1P21291 193 aaKnown RBP10.52□□□□□ -0.73
COMMD1-202ENST00000427417 NNMTP40261 264 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 CSKP41240 450 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 MAPK8P45983 427 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 NOVA1P51513 510 aaKnown RBP10.52□□□□□ -0.73
COMMD1-202ENST00000427417 KCNMA1Q12791 1236 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 PLEKHG6Q3KR16 790 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 PTPN20Q4JDL3 420 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 PITRM1Q5JRX3 1037 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 FKBP15Q5T1M5 1219 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 RNF219Q5W0B1 726 aaPredicted RBP10.52□□□□□ -0.73
COMMD1-202ENST00000427417 PSAPL1Q6NUJ1 521 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 RBM43Q6ZSC3 357 aaKnown RBP10.52□□□□□ -0.73
COMMD1-202ENST00000427417 SND1Q7KZF4 910 aaKnown RBP eCLIP10.52□□□□□ -0.73
COMMD1-202ENST00000427417 CFAP52Q8N1V2 620 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 HDDC3Q8N4P3 179 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 DNASE2BQ8WZ79 361 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 LMLNQ96KR4 655 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 GTPBP2Q9BX10 602 aaKnown RBP10.52□□□□□ -0.73
COMMD1-202ENST00000427417 NAA15Q9BXJ9 866 aaKnown RBP10.52□□□□□ -0.73
COMMD1-202ENST00000427417 ZDHHC5Q9C0B5 715 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 SLC32A1Q9H598 525 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 CAPN10Q9HC96 672 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 PLCB1Q9NQ66 1216 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 PRSS16Q9NQE7 514 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 ANO10Q9NW15 660 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 TAB2Q9NYJ8 693 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 COX16Q9P0S2 106 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 XPO7Q9UIA9 1087 aaKnown RBP10.52□□□□□ -0.73
COMMD1-202ENST00000427417 STAP1Q9ULZ2 295 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 PAXBP1Q9Y5B6 917 aa10.52□□□□□ -0.73
COMMD1-202ENST00000427417 A0A1B0GTW7 788 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 A0A1B0GVM2 712 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 TCAF2A6NFQ2 919 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 METTL12A8MUP2 240 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 F8VZ95 297 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 M0QYT0 321 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 ARHGAP33O14559 1287 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 OPHN1O60890 802 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 GRAP2O75791 330 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 MBD3O95983 291 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 F9P00740 461 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 CDH5P33151 784 aaPredicted RBP10.51□□□□□ -0.73
COMMD1-202ENST00000427417 SCNN1AP37088 669 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 MATKP42679 507 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 PITX1P78337 314 aaPredicted RBP10.51□□□□□ -0.73
COMMD1-202ENST00000427417 ECT2LQ008S8 904 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 SULT2A1Q06520 285 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 NME3Q13232 169 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 ARID5BQ14865 1188 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 HNRNPA1L2Q32P51 320 aaKnown RBP10.51□□□□□ -0.73
COMMD1-202ENST00000427417 FSCBQ5H9T9 825 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 ACBD5Q5T8D3 534 aaPredicted RBP10.51□□□□□ -0.73
COMMD1-202ENST00000427417 SH3PXD2AQ5TCZ1 1133 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 DCAF12L1Q5VU92 463 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 CDKAL1Q5VV42 579 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 ZNF776Q68DI1 518 aaPredicted RBP10.51□□□□□ -0.73
COMMD1-202ENST00000427417 DPY19L2P1Q6NXN4 242 aa10.51□□□□□ -0.73
COMMD1-202ENST00000427417 LRSAM1Q6UWE0 723 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms