RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 DDX39BQ13838 428 aaKnown RBP14.18□□□□□ -0.14
RPL28-202ENST00000426763 PLCL1Q15111 1095 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 BRMS1LQ5PSV4 323 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 CACHD1Q5VU97 1274 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 POLNQ7Z5Q5 900 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 TMEM159Q96B96 161 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 ZNF333Q96JL9 665 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 SNX27Q96L92 541 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 A0A0A0MRY4 1105 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 CILPO75339 1184 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 ATP4AP20648 1035 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 GABRR2P28476 465 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 AIF1P55008 147 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 HNRNPH2P55795 449 aaKnown RBP14.18□□□□□ -0.14
RPL28-202ENST00000426763 LCLAT1Q6UWP7 414 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 RASAL3Q86YV0 1011 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 ARID3BQ8IVW6 561 aaPredicted RBP14.18□□□□□ -0.14
RPL28-202ENST00000426763 SPATA13Q96N96 652 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 RNF157Q96PX1 679 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 MFSD1Q9H3U5 465 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 TLE6Q9H808 572 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 SELENONQ9NZV5 590 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 ARFGEF2Q9Y6D5 1785 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 OR56A5P0C7T3 313 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 RPL21P46778 160 aaKnown RBP14.18□□□□□ -0.14
RPL28-202ENST00000426763 EIF2B5Q13144 721 aaKnown RBP14.18□□□□□ -0.14
RPL28-202ENST00000426763 RFX8Q6ZV50 586 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 RBM23Q86U06 439 aaKnown RBP14.18□□□□□ -0.14
RPL28-202ENST00000426763 NRDE2Q9H7Z3 1164 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 TARBP2Q15633 366 aaKnown RBP14.18□□□□□ -0.14
RPL28-202ENST00000426763 C11orf96Q7Z7L8 435 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 CAVIN3Q969G5 261 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 ING2Q9H160 280 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 CHST7Q9NS84 486 aa14.18□□□□□ -0.14
RPL28-202ENST00000426763 SYN3O14994 580 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 TPBGLP0DKB5 382 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 HNRNPH3P31942 346 aaKnown RBP14.17□□□□□ -0.14
RPL28-202ENST00000426763 SERPINH1P50454 418 aaKnown RBP14.17□□□□□ -0.14
RPL28-202ENST00000426763 IRF2BP2Q7Z5L9 587 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 KCNK16Q96T55 309 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 SCOCQ9UIL1 159 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 ZSCAN5CA6NGD5 496 aaPredicted RBP14.17□□□□□ -0.14
RPL28-202ENST00000426763 RPSAP08865 295 aaKnown RBP14.17□□□□□ -0.14
RPL28-202ENST00000426763 MAPK1P28482 360 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 GRB14Q14449 540 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 SCARA3Q6AZY7 606 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 PSTKQ8IV42 348 aaKnown RBP14.17□□□□□ -0.14
RPL28-202ENST00000426763 TAGAPQ8N103 731 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 C1orf127Q8N9H9 656 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 ZSWIM2Q8NEG5 633 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 FBXO22Q8NEZ5 403 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 COPS7BQ9H9Q2 264 aaPredicted RBP14.17□□□□□ -0.14
RPL28-202ENST00000426763 XPNPEP1Q9NQW7 623 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 ETNK2Q9NVF9 386 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 GGT7Q9UJ14 662 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 FAM50BQ9Y247 325 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 ARL5CA6NH57 179 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 VAPBO95292 243 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 ALOX15P16050 662 aaPredicted RBP14.17□□□□□ -0.14
RPL28-202ENST00000426763 CYP2A7P20853 494 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 DNAJC3Q13217 504 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 OTOAQ7RTW8 1153 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 TRMT11Q7Z4G4 463 aaKnown RBP14.17□□□□□ -0.14
RPL28-202ENST00000426763 SLC22A9Q8IVM8 553 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 MYCBPAPQ8TBZ2 947 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 TUBGCP3Q96CW5 907 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 ZBTB10Q96DT7 871 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 KREMEN1Q96MU8 473 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 CPNE1Q99829 537 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 RAD18Q9NS91 495 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 INTS6LQ5JSJ4 861 aaKnown RBP14.17□□□□□ -0.14
RPL28-202ENST00000426763 ZNF470Q6ECI4 717 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 LRRC39Q96DD0 335 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 FAM84AQ96KN4 292 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 MRPL46Q9H2W6 279 aaKnown RBP14.17□□□□□ -0.14
RPL28-202ENST00000426763 TMBIM4Q9HC24 238 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 TXNRD2Q9NNW7 524 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 RGS18Q9NS28 235 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 TAS2R13Q9NYV9 303 aa14.17□□□□□ -0.14
RPL28-202ENST00000426763 PTPN3P26045 913 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 SOAT1P35610 550 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 CLCNKBP51801 687 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 CDK16Q00536 496 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 NAB1Q13506 487 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 NPY5RQ15761 445 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 PDCD2Q16342 344 aaPredicted RBP14.16□□□□□ -0.14
RPL28-202ENST00000426763 TMCO4Q5TGY1 634 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 FUT10Q6P4F1 479 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 FAM9CQ8IZT9 166 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 GPR152Q8TDT2 470 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 ERP27Q96DN0 273 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 PANX3Q96QZ0 392 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 CYP4F12Q9HCS2 524 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 AURKCQ9UQB9 309 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 EVPLLA8MZ36 301 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 HOXB8P17481 243 aaPredicted RBP14.16□□□□□ -0.14
RPL28-202ENST00000426763 MAP2K2P36507 400 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 BTKQ06187 659 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 BMPR2Q13873 1038 aa14.16□□□□□ -0.14
RPL28-202ENST00000426763 MDM1Q8TC05 714 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms