RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CLMPQ9H6B4 373 aa13.22□□□□□ -0.29
SGCE-203ENST00000425444 PRDM16Q9HAZ2 1276 aa13.22□□□□□ -0.29
SGCE-203ENST00000425444 SIX2Q9NPC8 291 aa13.22□□□□□ -0.29
SGCE-203ENST00000425444 AJAP1Q9UKB5 411 aaPredicted RBP13.22□□□□□ -0.29
SGCE-203ENST00000425444 CEP83Q9Y592 693 aa13.22□□□□□ -0.29
SGCE-203ENST00000425444 MBD3O95983 291 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 CISD3P0C7P0 127 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 ATXN1LP0C7T5 689 aaKnown RBP13.21□□□□□ -0.29
SGCE-203ENST00000425444 PNMA6AP0CW24 399 aaPredicted RBP13.21□□□□□ -0.29
SGCE-203ENST00000425444 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
SGCE-203ENST00000425444 KRT9P35527 623 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 CFHR1Q03591 330 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 ARID5AQ03989 594 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 GEN1Q17RS7 908 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 ADGRF1Q5T601 910 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 LRRC69Q6ZNQ3 347 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 SLC41A1Q8IVJ1 513 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 FAM217AQ8IXS0 508 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 ENOX1Q8TC92 643 aaKnown RBP13.21□□□□□ -0.29
SGCE-203ENST00000425444 DQX1Q8TE96 717 aaKnown RBP13.21□□□□□ -0.29
SGCE-203ENST00000425444 UCMAQ8WVF2 138 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 ERLEC1Q96DZ1 483 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 P2RY11Q96G91 374 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 FCRL3Q96P31 734 aaPredicted RBP13.21□□□□□ -0.29
SGCE-203ENST00000425444 NOX5Q96PH1 765 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 SLC4A5Q9BY07 1137 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 CIPCQ9C0C6 399 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 PDCL3Q9H2J4 239 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 SYNCQ9H7C4 482 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 TAB2Q9NYJ8 693 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 CYTH4Q9UIA0 394 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 SLC27A6Q9Y2P4 619 aa13.21□□□□□ -0.29
SGCE-203ENST00000425444 TYW5A2RUC4 315 aaKnown RBP13.2□□□□□ -0.3
SGCE-203ENST00000425444 CAPN8A6NHC0 703 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 PAPSS1O43252 624 aaPredicted RBP13.2□□□□□ -0.3
SGCE-203ENST00000425444 GNSP15586 552 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 HOXD9P28356 352 aaPredicted RBP13.2□□□□□ -0.3
SGCE-203ENST00000425444 RPL34P49207 117 aaKnown RBP13.2□□□□□ -0.3
SGCE-203ENST00000425444 GRIK2Q13002 908 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 CAMK2BQ13554 666 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 STARD3Q14849 445 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 EIF4HQ15056 248 aaKnown RBP13.2□□□□□ -0.3
SGCE-203ENST00000425444 STX1AQ16623 288 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 CCDC183Q5T5S1 534 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 RBM43Q6ZSC3 357 aaKnown RBP13.2□□□□□ -0.3
SGCE-203ENST00000425444 TAC4Q86UU9 113 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 SLC47A2Q86VL8 602 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 C1orf131Q8NDD1 294 aaKnown RBP13.2□□□□□ -0.3
SGCE-203ENST00000425444 IPO4Q8TEX9 1081 aaKnown RBP13.2□□□□□ -0.3
SGCE-203ENST00000425444 TMA16Q96EY4 203 aaKnown RBP13.2□□□□□ -0.3
SGCE-203ENST00000425444 ACOX2Q99424 681 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 SLC2A11Q9BYW1 496 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 VPS16Q9H269 839 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 POPDC2Q9HBU9 364 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 ANO10Q9NW15 660 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 TOR4AQ9NXH8 423 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 SUSD2Q9UGT4 822 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 STOML2Q9UJZ1 356 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 FBXO10Q9UK96 956 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 NAALADL1Q9UQQ1 740 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 FHOD1Q9Y613 1164 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 RAD54BQ9Y620 910 aa13.2□□□□□ -0.3
SGCE-203ENST00000425444 TEP1Q99973 2627 aaKnown RBP13.19□□□□□ -0.3
SGCE-203ENST00000425444 UBR5O95071 2799 aaPredicted RBP13.19□□□□□ -0.3
SGCE-203ENST00000425444 FOXN3O00409 490 aaPredicted RBP13.19□□□□□ -0.3
SGCE-203ENST00000425444 ACSL4O60488 711 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 MOCS2O96007 188 aaPredicted RBP13.19□□□□□ -0.3
SGCE-203ENST00000425444 IGLV3-27P01718 113 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 APOEP02649 317 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 FYNP06241 537 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 BPIFB4P59827 614 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 KCNC4Q03721 635 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 NNTQ13423 1086 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 DRAP1Q14919 205 aaPredicted RBP13.19□□□□□ -0.3
SGCE-203ENST00000425444 E2F5Q15329 346 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 SYCP2LQ5T4T6 812 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 SMYD5Q6GMV2 418 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 TMEM110Q86TL2 294 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 ANKRD20A12PQ8NF67 263 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 PPP1R13BQ96KQ4 1090 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 CPXM1Q96SM3 734 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 CDC6Q99741 560 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 GABRG3Q99928 467 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 DDX50Q9BQ39 737 aaKnown RBP13.19□□□□□ -0.3
SGCE-203ENST00000425444 ZDHHC5Q9C0B5 715 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 FAM204AQ9H8W3 233 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 CALCOCO1Q9P1Z2 691 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 TJP2Q9UDY2 1190 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 HCN2Q9UL51 889 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 CLEC4EQ9ULY5 219 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 PCDHGC3Q9UN70 934 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 TLR6Q9Y2C9 796 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 BOD1L1Q8NFC6 3051 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 LRRK2Q5S007 2527 aa13.19□□□□□ -0.3
SGCE-203ENST00000425444 SYNJ2BP-COX16A0A087WUM0 186 aa13.18□□□□□ -0.3
SGCE-203ENST00000425444 IGHV1OR15-9A0A0B4J2B8 117 aa13.18□□□□□ -0.3
SGCE-203ENST00000425444 GOLGA6L7A0A1B0GV03 622 aa13.18□□□□□ -0.3
SGCE-203ENST00000425444 A0A1W2PQF6 199 aa13.18□□□□□ -0.3
SGCE-203ENST00000425444 GFRA2O00451 464 aa13.18□□□□□ -0.3
SGCE-203ENST00000425444 IRAK2O43187 625 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms