RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 CHMP2BQ9UQN3 213 aa17.03■□□□□ 0.32
CMTM3-202ENST00000424011 PRG3Q9Y2Y8 225 aaPredicted RBP17.03■□□□□ 0.32
CMTM3-202ENST00000424011 A0A0A0MRY4 1105 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 CFAP73A6NFT4 308 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 MFSD11O43934 449 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 HSPA8P11142 646 aaKnown RBP17.02■□□□□ 0.32
CMTM3-202ENST00000424011 ALADP13716 330 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 TPSB2P20231 275 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 CDC25CP30307 473 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 SLC5A3P53794 718 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 WDR4P57081 412 aaKnown RBP17.02■□□□□ 0.32
CMTM3-202ENST00000424011 ITIH4Q14624 930 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 TPSAB1Q15661 275 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 SLC39A12Q504Y0 691 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 NUGGCQ68CJ6 796 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 SLC39A5Q6ZMH5 540 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 SPATA13Q96N96 652 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 BRD8Q9H0E9 1235 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 ACSS3Q9H6R3 686 aa17.02■□□□□ 0.32
CMTM3-202ENST00000424011 A0A1W2PPM1 405 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 DCLK1O15075 740 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 SNX3O60493 162 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 PQBP1O60828 265 aaKnown RBP17.02■□□□□ 0.31
CMTM3-202ENST00000424011 OPHN1O60890 802 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 ELK3P41970 407 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 PAPOLAP51003 745 aaKnown RBP17.02■□□□□ 0.31
CMTM3-202ENST00000424011 YWHAGP61981 247 aaKnown RBP eCLIP17.02■□□□□ 0.31
CMTM3-202ENST00000424011 CDK16Q00536 496 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 GPNMBQ14956 572 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 PRKD1Q15139 912 aaPredicted RBP17.02■□□□□ 0.31
CMTM3-202ENST00000424011 ANKRD33Q7Z3H0 272 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 C4orf33Q8N1A6 199 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 ANKS4BQ8N8V4 417 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 RNF34Q969K3 372 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 TGS1Q96RS0 853 aaKnown RBP17.02■□□□□ 0.31
CMTM3-202ENST00000424011 TKTL2Q9H0I9 626 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 TMPRSS4Q9NRS4 437 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 DNAJB4Q9UDY4 337 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 ADAM28Q9UKQ2 775 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 TEX264Q9Y6I9 313 aa17.02■□□□□ 0.31
CMTM3-202ENST00000424011 DIAPH2O60879 1101 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 LUC7L3O95232 432 aaKnown RBP17.01■□□□□ 0.31
CMTM3-202ENST00000424011 PARNO95453 639 aaKnown RBP17.01■□□□□ 0.31
CMTM3-202ENST00000424011 ALDH2P05091 517 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 ATN1P54259 1190 aaPredicted RBP17.01■□□□□ 0.31
CMTM3-202ENST00000424011 SEMA5AQ13591 1074 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 FAXCQ5TGI0 409 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 BTBD8Q5XKL5 378 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 MAGEB18Q96M61 343 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 MRPL9Q9BYD2 267 aaKnown RBP17.01■□□□□ 0.31
CMTM3-202ENST00000424011 TNFRSF10BO14763 440 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 PRPF4O43172 522 aaKnown RBP eCLIP17.01■□□□□ 0.313e-8■■■■■ 27.8
CMTM3-202ENST00000424011 AVILO75366 819 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 OAS1P00973 400 aaKnown RBP17.01■□□□□ 0.31
CMTM3-202ENST00000424011 ERCC2P18074 760 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 FOXN2P32314 431 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 SERPINB6P35237 376 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 AP1B1Q10567 949 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 BRMS1LQ5PSV4 323 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 ANKRD20A2Q5SQ80 823 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 ANKRD20A1Q5TYW2 823 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 ANKRD20A3Q5VUR7 823 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 TAC4Q86UU9 113 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 AGGF1Q8N302 714 aaeCLIP17.01■□□□□ 0.31
CMTM3-202ENST00000424011 CCNYQ8ND76 341 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 SCAMP5Q8TAC9 235 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 DQX1Q8TE96 717 aaKnown RBP17.01■□□□□ 0.31
CMTM3-202ENST00000424011 DENND1AQ8TEH3 1009 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 ARMC5Q96C12 935 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 CYTH2Q99418 400 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 PAFAH2Q99487 392 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 PAIP2Q9BPZ3 127 aaKnown RBP17.01■□□□□ 0.31
CMTM3-202ENST00000424011 DHRS4Q9BTZ2 278 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 XAB2Q9HCS7 855 aaKnown RBP17.01■□□□□ 0.31
CMTM3-202ENST00000424011 ABI2Q9NYB9 513 aaPredicted RBP17.01■□□□□ 0.31
CMTM3-202ENST00000424011 OR12D3Q9UGF7 316 aa17.01■□□□□ 0.31
CMTM3-202ENST00000424011 OR6C75A6NL08 312 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 ASMTLO95671 621 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 GSTA2P09210 222 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 MX2P20592 715 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 ROR2Q01974 943 aaKnown RBP17■□□□□ 0.31
CMTM3-202ENST00000424011 VARS2Q5ST30 1063 aaKnown RBP17■□□□□ 0.31
CMTM3-202ENST00000424011 ADGRD1Q6QNK2 874 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 SCN4BQ8IWT1 228 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 CCDC33Q8N5R6 958 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 C8orf48Q96LL4 319 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 CASD1Q96PB1 797 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 SMC6Q96SB8 1091 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 LGMNQ99538 433 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 OSBPL2Q9H1P3 480 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 FBXO44Q9H4M3 255 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 MFHAS1Q9Y4C4 1052 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 PCDHB5Q9Y5E4 795 aa17■□□□□ 0.31
CMTM3-202ENST00000424011 MTSS1O43312 755 aa16.99■□□□□ 0.31
CMTM3-202ENST00000424011 METTL18O95568 372 aa16.99■□□□□ 0.31
CMTM3-202ENST00000424011 IGLV3-25P01717 112 aa16.99■□□□□ 0.31
CMTM3-202ENST00000424011 HTR7P34969 479 aa16.99■□□□□ 0.31
CMTM3-202ENST00000424011 ELAVL2Q12926 359 aaKnown RBP16.99■□□□□ 0.31
CMTM3-202ENST00000424011 CTXN3Q4LDR2 81 aa16.99■□□□□ 0.31
CMTM3-202ENST00000424011 ZNF280DQ6N043 979 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms