RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 TARSL2A2RTX5 802 aaKnown RBP17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 MID1O15344 667 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 YEATS4O95619 227 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 AFMP43652 599 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 GCLMP48507 274 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 SLC8A3P57103 927 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 MCCD1P59942 119 aaPredicted RBP17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 ST8SIA6P61647 398 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 RHDQ02161 417 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 PPP3CAQ08209 521 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 KCNH2Q12809 1159 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 SLC45A4Q5BKX6 768 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 C9orf64Q5T6V5 341 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 BSPRYQ5W0U4 402 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 FIBINQ8TAL6 211 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 RNF139Q8WU17 664 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 MRGPRX3Q96LB0 322 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 TRAF3IP3Q9Y228 551 aa17.4■□□□□ 0.38
CHCHD3-202ENST00000423635 COL6A6A6NMZ7 2263 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 IRAK2O43187 625 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 TBL1XO60907 577 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 RNASEH2AO75792 299 aaKnown RBP17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 ASLP04424 464 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 SLC8A1P32418 973 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 RAD23BP54727 409 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 E2F1Q01094 437 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 PROX2Q3B8N5 592 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 PKDCCQ504Y2 493 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 INTS8Q75QN2 995 aaKnown RBP17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 SPATS2Q86XZ4 545 aaKnown RBP17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 MFSD2AQ8NA29 543 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 CCDC150Q8NCX0 1101 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 ZNF248Q8NDW4 579 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 SERAC1Q96JX3 654 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 OMDQ99983 421 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 UPF2Q9HAU5 1272 aaKnown RBP17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 ABCC13Q9NSE7 274 aa17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 INTS6Q9UL03 887 aaKnown RBP17.39■□□□□ 0.37
CHCHD3-202ENST00000423635 TULP2O00295 520 aa17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 XPO1O14980 1071 aaKnown RBP17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 LATO43561 262 aa17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 PDIA4P13667 645 aaKnown RBP17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 GOT1P17174 413 aa17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 TAF1BQ53T94 588 aaPredicted RBP17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 RFWD3Q6PCD5 774 aa17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 SND1Q7KZF4 910 aaKnown RBP eCLIP17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 IQCHQ86VS3 1027 aa17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 MMAAQ8IVH4 418 aaKnown RBP17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 DHX40Q8IX18 779 aaKnown RBP17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 SCML4Q8N228 414 aa17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 EDEM1Q92611 657 aa17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 AZIN2Q96A70 460 aa17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 INTS4Q96HW7 963 aaKnown RBP17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 HIC2Q96JB3 615 aa17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 ZNF578Q96N58 590 aaPredicted RBP17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 ZNF396Q96N95 335 aaPredicted RBP17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 FAM129BQ96TA1 746 aa17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 CISHQ9NSE2 258 aa17.38■□□□□ 0.37
CHCHD3-202ENST00000423635 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 GOLGA6L7A0A1B0GV03 622 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 YJEFN3A6XGL0 299 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 E7ENQ6 273 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 CALUO43852 315 aaPredicted RBP17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 MT-CO3P00414 261 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 IGLV3-27P01718 113 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 SRPRAP08240 638 aaKnown RBP17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 TRIM49P0CI25 452 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 TRIM49CP0CI26 452 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 SLC6A4P31645 630 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 CSKP41240 450 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 ADPRHP54922 357 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 UCNP55089 124 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 NFIL3Q16649 462 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 KMT5BQ4FZB7 885 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 FAM133BQ5BKY9 247 aaKnown RBP17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 MFN1Q8IWA4 741 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 UNC45BQ8IWX7 931 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 GRAMD1CQ8IYS0 662 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 AADATQ8N5Z0 425 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 LGMNQ99538 433 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 LRRC4Q9HBW1 653 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 TMEM8AQ9HCN3 771 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 ARHGAP20Q9P2F6 1191 aa17.37■□□□□ 0.37
CHCHD3-202ENST00000423635 MYO18BQ8IUG5 2567 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 ITIH6Q6UXX5 1313 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 NAV2Q8IVL1 2488 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 MSI1O43347 362 aaKnown RBP17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 ACSL4O60488 711 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 C5AR1P21730 350 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 GTF2H1P32780 548 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 SLC11A2P49281 568 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 TMPRSS3P57727 454 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 OVGP1Q12889 678 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 ZNF211Q13398 564 aaPredicted RBP17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 KRT39Q6A163 491 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 NAPEPLDQ6IQ20 393 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 MSANTD2Q6P1R3 559 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 LSMEM2Q8N112 164 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 OR14C36Q8NHC7 312 aa17.36■□□□□ 0.37
CHCHD3-202ENST00000423635 SNRNP27Q8WVK2 155 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms