RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 CD101Q93033 1021 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 NTAN1Q96AB6 310 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 MSANTD3Q96H12 275 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 ZNF830Q96NB3 372 aaPredicted RBP9.58□□□□□ -0.88
PDGFC-202ENST00000422544 RPRD1AQ96P16 312 aaPredicted RBP9.58□□□□□ -0.88
PDGFC-202ENST00000422544 XPO6Q96QU8 1125 aaKnown RBP9.58□□□□□ -0.88
PDGFC-202ENST00000422544 PEBP4Q96S96 227 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 LACRTQ9GZZ8 138 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 OSBPL2Q9H1P3 480 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 ZWILCHQ9H900 591 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 DNAJC17Q9NVM6 304 aaKnown RBP9.58□□□□□ -0.88
PDGFC-202ENST00000422544 GPATCH2LQ9NWQ4 482 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 DEC1Q9P2X7 70 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 OR12D3Q9UGF7 316 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 SALL4Q9UJQ4 1053 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 FZD10Q9ULW2 581 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 USP18Q9UMW8 372 aa9.58□□□□□ -0.88
PDGFC-202ENST00000422544 MRPS17Q9Y2R5 130 aaKnown RBP9.58□□□□□ -0.88
PDGFC-202ENST00000422544 GPR179Q6PRD1 2367 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 A0A0A6YYK5 440 aaPredicted RBP9.57□□□□□ -0.88
PDGFC-202ENST00000422544 TYW5A2RUC4 315 aaKnown RBP9.57□□□□□ -0.88
PDGFC-202ENST00000422544 DRGXA6NNA5 263 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.57□□□□□ -0.88
PDGFC-202ENST00000422544 E9PAM4 449 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 BUB1O43683 1085 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 PRPSAP2O60256 369 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 CACNG3O60359 315 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 CNTN5O94779 1100 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 EGFP01133 1207 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 CISD3P0C7P0 127 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 TARSP26639 723 aaKnown RBP9.57□□□□□ -0.88
PDGFC-202ENST00000422544 IL1R2P27930 398 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 EIF2DP41214 584 aaKnown RBP9.57□□□□□ -0.88
PDGFC-202ENST00000422544 ARHGAP25P42331 645 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 IRAK1P51617 712 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 CLCN6P51797 869 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 NAP1L1P55209 391 aaKnown RBP9.57□□□□□ -0.88
PDGFC-202ENST00000422544 KDSRQ06136 332 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 SCAPQ12770 1279 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 GRSF1Q12849 480 aaKnown RBP eCLIP9.57□□□□□ -0.88
PDGFC-202ENST00000422544 CA9Q16790 459 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 TMEM196Q5HYL7 178 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 EFHC2Q5JST6 749 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 KCNT1Q5JUK3 1230 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 RABGAP1LQ5R372 815 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 MPP7Q5T2T1 576 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 ARTNQ5T4W7 220 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 ERMARDQ5T6L9 678 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 TXNRD3NBQ6F5E7 133 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 ASTLQ6HA08 431 aaPredicted RBP9.57□□□□□ -0.88
PDGFC-202ENST00000422544 GRAMD4Q6IC98 578 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 FSTL4Q6MZW2 842 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 C1orf228Q6PIY5 440 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 LRRC31Q6UY01 552 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 CYP4V2Q6ZWL3 525 aaPredicted RBP9.57□□□□□ -0.88
PDGFC-202ENST00000422544 SFTPA1Q8IWL2 248 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 ZNF687Q8N1G0 1237 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 CARNMT1Q8N4J0 409 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 HJURPQ8NCD3 748 aaPredicted RBP9.57□□□□□ -0.88
PDGFC-202ENST00000422544 PBXIP1Q96AQ6 731 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 PNKPQ96T60 521 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 NELL2Q99435 816 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 NCAPGQ9BPX3 1015 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 IRX2Q9BZI1 471 aaPredicted RBP9.57□□□□□ -0.88
PDGFC-202ENST00000422544 DHX35Q9H5Z1 703 aaKnown RBP9.57□□□□□ -0.88
PDGFC-202ENST00000422544 LMAN1LQ9HAT1 526 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 LTB4R2Q9NPC1 389 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 ARHGEF4Q9NR80 690 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 RBM12Q9NTZ6 932 aaKnown RBP9.57□□□□□ -0.88
PDGFC-202ENST00000422544 TRIM10Q9UDY6 481 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 FBXO10Q9UK96 956 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 SIT1Q9Y3P8 196 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 HYOU1Q9Y4L1 999 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 ADGRG1Q9Y653 693 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 FRYQ5TBA9 3013 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 CACNA1GO43497 2377 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 ZZEF1O43149 2961 aa9.57□□□□□ -0.88
PDGFC-202ENST00000422544 COL4A3Q01955 1670 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 TBC1D3BA6NDS4 549 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 ANTXRLA6NF34 631 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 BTNL10A8MVZ5 291 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 PROB1E7EW31 1015 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 H0Y626 953 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 PJA2O43164 708 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 PI15O43692 258 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 NRDCO43847 1150 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 CREB3O43889 395 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 BUB1BO60566 1050 aaPredicted RBP9.56□□□□□ -0.88
PDGFC-202ENST00000422544 GFRA3O60609 400 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 LRIG2O94898 1065 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 KAT7O95251 611 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 APODP05090 189 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 DCNP07585 359 aaKnown RBP9.56□□□□□ -0.88
PDGFC-202ENST00000422544 RARAP10276 462 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 PYGBP11216 843 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 CHRNB1P11230 501 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 DRD1P21728 446 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 L1CAMP32004 1257 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 MAN1A1P33908 653 aa9.56□□□□□ -0.88
PDGFC-202ENST00000422544 GRIA2P42262 883 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms