RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 COG4Q9H9E3 785 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 SAR1AQ9NR31 198 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 AURKCQ9UQB9 309 aa13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 RUVBL2Q9Y230 463 aaKnown RBP13.54□□□□□ -0.24
TNFRSF8-203ENST00000417814 MKI67P46013 3256 aaKnown RBP13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 SDR42E2A6NKP2 422 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 ITGA2BP08514 1039 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 USP17L7P0C7H9 530 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 RALGDSQ12967 914 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 LRRC38Q5VT99 294 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 CMASQ8NFW8 434 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 RDM1Q8NG50 284 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 OR6P1Q8NGX9 317 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 TRPV6Q9H1D0 765 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 SUDS3Q9H7L9 328 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 DTLQ9NZJ0 730 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 SSX2IPQ9Y2D8 614 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 COMMD10Q9Y6G5 202 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 GPC4O75487 556 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 PIRTP0C851 137 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 SKIV2L2P42285 1042 aaKnown RBP13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 SLC12A2P55011 1212 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 LCA5Q86VQ0 697 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 CDKL3Q8IVW4 592 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 KCTD4Q8WVF5 259 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 KLRG1Q96E93 195 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 CSPG4P5Q96PW8 444 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 ECSITQ9BQ95 431 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 FERMT1Q9BQL6 677 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 WDR35Q9P2L0 1181 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 LRRC42Q9Y546 428 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 NFKBIEO00221 500 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 EEF2KO00418 725 aaKnown RBP13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 FOXD2O60548 495 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 VAPBO95292 243 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 MT-CYBP00156 380 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 GSTA2P09210 222 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 SLC6A3Q01959 620 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 HSF5Q4G112 596 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 PACS1Q6VY07 963 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 DCBLD1Q8N8Z6 715 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 SKA1Q96BD8 255 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 DCPSQ96C86 337 aaKnown RBP13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 FAM210AQ96ND0 272 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 SLC39A3Q9BRY0 314 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 ZNF518BQ9C0D4 1074 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 CHCHD3Q9NX63 227 aaKnown RBP13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 BFARQ9NZS9 450 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 CCDC167Q9P0B6 97 aa13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 HEMK1Q9Y5R4 338 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF8-203ENST00000417814 FAM72CH0Y354 149 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 VAV1P15498 845 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 IL4RP24394 825 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 FLOT2Q14254 428 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 KCNJ11Q14654 390 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 C6orf52Q5T4I8 152 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 FAM72AQ5TYM5 149 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 FAM72DQ6L9T8 149 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 PIGZQ86VD9 579 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 FAM72BQ86X60 149 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 TDRPQ86YL5 185 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 TDRD5Q8NAT2 981 aaKnown RBP13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 DNAJB3Q8WWF6 145 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 RCN3Q96D15 328 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 CAAP1Q9H8G2 361 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 THAP1Q9NVV9 213 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 PCDHGB4Q9UN71 923 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 PCDHGB5Q9Y5G0 923 aa13.52□□□□□ -0.24
TNFRSF8-203ENST00000417814 MAGEA13PA6NCF6 341 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 H3BRB1 525 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 DNAJA2O60884 412 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 PIGNO95427 931 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 ALDOAP04075 364 aaKnown RBP13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 ETV4P43268 484 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 SDHAF4Q5VUM1 108 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 NAT16Q8N8M0 369 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 DRAXINQ8NBI3 349 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 MAPK15Q8TD08 544 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 LPPQ93052 612 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 KLHL4Q9C0H6 718 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 PCDHAC1Q9H158 963 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 SMARCAD1Q9H4L7 1026 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 TUT1Q9H6E5 874 aaKnown RBP13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 ADAMTS6Q9UKP5 1117 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 DOCK5Q9H7D0 1870 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 AGRPO00253 132 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 BEST1O76090 585 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 RECQL4O94761 1208 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 ZNF132P52740 706 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 FKBP1AP62942 108 aaKnown RBP13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 TTLL4Q14679 1199 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 TBC1D25Q3MII6 688 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 SLC41A1Q8IVJ1 513 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 DENND6AQ8IWF6 608 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 ST13P4Q8IZP2 240 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 C2orf40Q9H1Z8 148 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 VCX3BQ9H321 246 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 SNX15Q9NRS6 342 aa13.52□□□□□ -0.25
TNFRSF8-203ENST00000417814 GIMAP2Q9UG22 337 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms