RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 HOXA13P31271 388 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 BCL6P41182 706 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 P2RY2P41231 377 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 OR1G1P47890 313 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 NOVP48745 357 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 SCNN1BP51168 640 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 TUBB4BP68371 445 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 MRPS9P82933 396 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 PTH1RQ03431 593 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 MYO1EQ12965 1108 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 DRP2Q13474 957 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 PTPAQ15257 358 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 UBE3CQ15386 1083 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 TUBB8Q3ZCM7 444 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 FBXO43Q4G163 708 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 RNF219Q5W0B1 726 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 INO80CQ6PI98 192 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 CPLX2Q6PUV4 134 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 CYP2R1Q6VVX0 501 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 RTL10Q7L3V2 364 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 NAT16Q8N8M0 369 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 CCDC150Q8NCX0 1101 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 C3orf20Q8ND61 904 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 ENGASEQ8NFI3 743 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 MDGA1Q8NFP4 955 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 OLIG1Q8TAK6 271 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 KCNE4Q8WWG9 221 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 ARHGAP45Q92619 1136 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 USP7Q93009 1102 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 TCEAL4Q96EI5 215 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 RSRC1Q96IZ7 334 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 FAM81BQ96LP2 452 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 ZSWIM3Q96MP5 696 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 SCLT1Q96NL6 688 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 ANKRD27Q96NW4 1050 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 TTC1Q99614 292 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 G6PC3Q9BUM1 346 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 ASPSCR1Q9BZE9 553 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 TRIM8Q9BZR9 551 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 ZDHHC5Q9C0B5 715 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 MMADHCQ9H3L0 296 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 IFT22Q9H7X7 185 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 EPB41L4AQ9HCS5 686 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 CRTAC1Q9NQ79 661 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 TMED5Q9Y3A6 229 aa5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 TIMM13Q9Y5L4 95 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-206ENST00000417628 MGAQ8IWI9 3026 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 COL1A2P08123 1366 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 ANO9A1A5B4 782 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 ERICH2A1L162 156 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 KLK10O43240 276 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 CEP104O60308 925 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 PENKP01210 267 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 LRG1P02750 347 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 PROCP04070 461 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 ZNF883P0CG24 379 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 PYGMP11217 842 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 TOP1P11387 765 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 ZFXP17010 805 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 PTPN2P17706 415 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 CYP11B2P19099 503 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 GRK2P25098 689 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 SLC8A1P32418 973 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 GRK3P35626 688 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 DNM2P50570 870 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 DYNC1I2Q13409 638 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 LSAMPQ13449 338 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 MTMR1Q13613 665 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 IGFBP7Q16270 282 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 QRICH1Q2TAL8 776 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 ITPRIPL2Q3MIP1 535 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 ARHGAP29Q52LW3 1261 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 CCDC92Q53HC0 331 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 GPATCH4Q5T3I0 446 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 TWF2Q6IBS0 349 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 FUT10Q6P4F1 479 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 TLDC1Q6P9B6 456 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 PRSS55Q6UWB4 352 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 SYNE3Q6ZMZ3 975 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 PDZD4Q76G19 769 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 YTHDF3Q7Z739 585 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 DHX40Q8IX18 779 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 COLGALT2Q8IYK4 626 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 PARD3BQ8TEW8 1205 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 RLN3Q8WXF3 142 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 FBXW5Q969U6 566 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 PGBD4Q96DM1 585 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 CDK5RAP3Q96JB5 506 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 HRASLS5Q96KN8 279 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 FCRL2Q96LA5 508 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 STRBPQ96SI9 672 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 PCYT2Q99447 389 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 NAP1L3Q99457 506 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 PUS7LQ9H0K6 701 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 BHMT2Q9H2M3 363 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 RABEP2Q9H5N1 569 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 EXOC1Q9NV70 894 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 RTEL1Q9NZ71 1219 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 B4GALT6Q9UBX8 382 aa5.83□□□□□ -1.48
ECHDC1-206ENST00000417628 ADAM21Q9UKJ8 722 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms