RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 CCHCR1Q8TD31 782 aa17.48■□□□□ 0.39
CALD1-204ENST00000417172 UBLCP1Q8WVY7 318 aaPredicted RBP17.48■□□□□ 0.39
CALD1-204ENST00000417172 CPT1BQ92523 772 aa17.48■□□□□ 0.39
CALD1-204ENST00000417172 IGSF8Q969P0 613 aa17.48■□□□□ 0.39
CALD1-204ENST00000417172 RTP4Q96DX8 246 aa17.48■□□□□ 0.39
CALD1-204ENST00000417172 BTN2A3PQ96KV6 586 aa17.48■□□□□ 0.39
CALD1-204ENST00000417172 HCFC1R1Q9NWW0 138 aa17.48■□□□□ 0.39
CALD1-204ENST00000417172 SMPD4Q9NXE4 827 aa17.48■□□□□ 0.39
CALD1-204ENST00000417172 SEPT10Q9P0V9 454 aa17.48■□□□□ 0.39
CALD1-204ENST00000417172 MTRF1LQ9UGC7 380 aaKnown RBP17.48■□□□□ 0.39
CALD1-204ENST00000417172 TPX2Q9ULW0 747 aaKnown RBP17.48■□□□□ 0.39
CALD1-204ENST00000417172 PER2O15055 1255 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 PPFIA2O75334 1257 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 RFPL2O75678 378 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 CNTN5O94779 1100 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 LRG1P02750 347 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 BASP1P80723 227 aaKnown RBP17.47■□□□□ 0.39
CALD1-204ENST00000417172 ALFQ53S48 1182 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 HEATR6Q6AI08 1181 aaKnown RBP17.47■□□□□ 0.39
CALD1-204ENST00000417172 ARHGAP36Q6ZRI8 547 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 GAREM2Q75VX8 874 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 TFAP2DQ7Z6R9 452 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 TMC8Q8IU68 726 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 ATP6V0D2Q8N8Y2 350 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 RWDD3Q9Y3V2 267 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 FARP1Q9Y4F1 1045 aaPredicted RBP17.47■□□□□ 0.39
CALD1-204ENST00000417172 C5orf42Q9H799 3197 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 AGPSO00116 658 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 KCNK1O00180 336 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 TMEM63AO94886 807 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 GABRR2P28476 465 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 NUMBP49757 651 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 RING1Q06587 406 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 FBXL22Q6P050 247 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 ARHGAP12Q8IWW6 846 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 OR2W6PQ8NHA6 318 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 HTR3CQ8WXA8 447 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 PRCCQ92733 491 aaPredicted RBP17.47■□□□□ 0.39
CALD1-204ENST00000417172 LRRC45Q96CN5 670 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 P2RY11Q96G91 374 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 C1orf74Q96LT6 269 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 ZIM3Q96PE6 472 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 PRMT1Q99873 361 aaKnown RBP17.47■□□□□ 0.39
CALD1-204ENST00000417172 LRRC3Q9BY71 257 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 EPB41L4BQ9H329 900 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 SEMA4AQ9H3S1 761 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 MAFFQ9ULX9 164 aa17.47■□□□□ 0.39
CALD1-204ENST00000417172 NOTCH4Q99466 2003 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 MYO9BQ13459 2157 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 TNRC18O15417 2968 aaPredicted RBP17.46■□□□□ 0.39
CALD1-204ENST00000417172 CFAP69A5D8W1 941 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 BANF1O75531 89 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 METTL18O95568 372 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 KLKB1P03952 638 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 EPCAMP16422 314 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 SLC6A4P31645 630 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 ZNF135P52742 658 aaPredicted RBP17.46■□□□□ 0.39
CALD1-204ENST00000417172 ZXDBP98169 803 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 PDK1Q15118 436 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 HP1BP3Q5SSJ5 553 aaPredicted RBP17.46■□□□□ 0.39
CALD1-204ENST00000417172 STXBP5Q5T5C0 1151 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 RFWD3Q6PCD5 774 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 ITIH5Q86UX2 942 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 ZNF276Q8N554 614 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 ARL14EPQ8N8R7 260 aaPredicted RBP17.46■□□□□ 0.39
CALD1-204ENST00000417172 CDK5RAP1Q96SZ6 601 aaKnown RBP17.46■□□□□ 0.39
CALD1-204ENST00000417172 PRDM16Q9HAZ2 1276 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 LRRC4CQ9HCJ2 640 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 FAM53CQ9NYF3 392 aa17.46■□□□□ 0.39
CALD1-204ENST00000417172 HBS1LQ9Y450 684 aaKnown RBP17.46■□□□□ 0.39
CALD1-204ENST00000417172 SZT2Q5T011 3432 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 H3BQF6 201 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 RNF103O00237 685 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 DFFAO00273 331 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 TRDMT1O14717 391 aaKnown RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 STC2O76061 302 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 NRG1Q02297 640 aaPredicted RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 GALNT2Q10471 571 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 CCDC149Q6ZUS6 474 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 MTERF4Q7Z6M4 381 aaKnown RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 RBM23Q86U06 439 aaKnown RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 CHSY1Q86X52 802 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 DENND1CQ8IV53 801 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 TTC16Q8NEE8 873 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 ZFRQ96KR1 1074 aaKnown RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 TGS1Q96RS0 853 aaKnown RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 CORO1BQ9BR76 489 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 VIPAS39Q9H9C1 493 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 MAN1C1Q9NR34 630 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 RAB6BQ9NRW1 208 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 UXTQ9UBK9 157 aaPredicted RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 SLC12A6Q9UHW9 1150 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 GOLGA6BA6NDN3 693 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 HACD1B0YJ81 288 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 PPP1R12AO14974 1030 aaPredicted RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 GARSP41250 739 aaKnown RBP17.45■□□□□ 0.38
CALD1-204ENST00000417172 PMS2P54278 862 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 UBE3AQ05086 875 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 WASHC5Q12768 1159 aa17.45■□□□□ 0.38
CALD1-204ENST00000417172 GPM6BQ13491 265 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms