RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ROR1Q01973 937 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 ITGADQ13349 1161 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 CEACAM7Q14002 265 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 CYP2A13Q16696 494 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 MGAT5BQ3V5L5 792 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 CASC4Q6P4E1 433 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 GPR180Q86V85 440 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 TMEM130Q8N3G9 435 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 EMC1Q8N766 993 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 UPF1Q92900 1129 aaKnown RBP eCLIP15.07■□□□□ 0
NCKIPSD-204ENST00000416649 MARK4Q96L34 752 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 WDR55Q9H6Y2 383 aaPredicted RBP15.07■□□□□ 0
NCKIPSD-204ENST00000416649 RNF181Q9P0P0 153 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 PADI4Q9UM07 663 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 ADM5C9JUS6 153 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 ZC3H11AO75152 810 aaKnown RBP eCLIP15.07■□□□□ 0
NCKIPSD-204ENST00000416649 APOEP02649 317 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 SERPINE1P05121 402 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 MCF2P10911 925 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 TSHRP16473 764 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 MMP8P22894 467 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 ACADVLP49748 655 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 MMRN1Q13201 1228 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 NR1D2Q14995 579 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 XKR9Q5GH70 373 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 FGD3Q5JSP0 725 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 SLC9A4Q6AI14 798 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 THOC7Q6I9Y2 204 aaKnown RBP15.07■□□□□ 0
NCKIPSD-204ENST00000416649 DHRS4L2Q6PKH6 230 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 FAM160B2Q86V87 743 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 ZNF606Q8WXB4 792 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 MOCOSQ96EN8 888 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 VCPIP1Q96JH7 1222 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 ZNF668Q96K58 619 aaPredicted RBP15.07■□□□□ 0
NCKIPSD-204ENST00000416649 OR52B2Q96RD2 323 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 SLC2A11Q9BYW1 496 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 ADA2Q9NZK5 511 aa15.07■□□□□ 0
NCKIPSD-204ENST00000416649 KCNN4O15554 427 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 STAM2O75886 525 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 HSPA4LO95757 839 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 CD247P20963 164 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 ACOT2P49753 483 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 ART3Q13508 389 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 CUL2Q13617 745 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 ZNF829Q3KNS6 432 aaPredicted RBP15.06■□□□□ 0
NCKIPSD-204ENST00000416649 LRRC38Q5VT99 294 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 NXNQ6DKJ4 435 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 C16orf89Q6UX73 402 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 UNC5AQ6ZN44 842 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 BBS12Q6ZW61 710 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 LRTOMTQ8WZ04 291 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 SORT1Q99523 831 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 VPS33BQ9H267 617 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 C20orf96Q9NUD7 363 aaPredicted RBP15.06■□□□□ 0
NCKIPSD-204ENST00000416649 ZNF358Q9NW07 568 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 ITGB1BP2Q9UKP3 347 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 ICAM1P05362 532 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 RALBP11234 206 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 KDELR1P24390 212 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 PRDX6P30041 224 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 RFC1P35251 1148 aaPredicted RBP15.06■□□□□ 0
NCKIPSD-204ENST00000416649 GNA12Q03113 381 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 PIGHQ14442 188 aaPredicted RBP15.06■□□□□ 0
NCKIPSD-204ENST00000416649 PPM1JQ5JR12 505 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 ZNF781Q8N8C0 355 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 POPDC2Q9HBU9 364 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 KMT5AQ9NQR1 393 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 OLAHQ9NV23 265 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 GPRC5DQ9NZD1 345 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 BCAP29Q9UHQ4 241 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 LDHAP00338 332 aaKnown RBP15.06■□□□□ 0
NCKIPSD-204ENST00000416649 ZNF12P17014 697 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 ZNF26P17031 533 aaPredicted RBP15.06■□□□□ 0
NCKIPSD-204ENST00000416649 PTPRAP18433 802 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 RPS12P25398 132 aaKnown RBP15.06■□□□□ 0
NCKIPSD-204ENST00000416649 PIK3R1P27986 724 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 GABRB2P47870 512 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 SLC10A2Q12908 348 aaPredicted RBP15.06■□□□□ 0
NCKIPSD-204ENST00000416649 SETD3Q86TU7 594 aaPredicted RBP15.06■□□□□ 0
NCKIPSD-204ENST00000416649 TNS4Q8IZW8 715 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 MPP5Q8N3R9 675 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 MAPK15Q8TD08 544 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 TMC2Q8TDI7 906 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 ATXN7L3BQ96GX2 97 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 SLC29A1Q99808 456 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 STN1Q9H668 368 aaKnown RBP15.06■□□□□ 0
NCKIPSD-204ENST00000416649 CLK4Q9HAZ1 481 aaKnown RBP15.06■□□□□ 0
NCKIPSD-204ENST00000416649 APOBEC3GQ9HC16 384 aaKnown RBP15.06■□□□□ 0
NCKIPSD-204ENST00000416649 KCNH7Q9NS40 1196 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 PNPLA3Q9NST1 481 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 PIH1D1Q9NWS0 290 aaKnown RBP15.06■□□□□ 0
NCKIPSD-204ENST00000416649 DNAJC28Q9NX36 388 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 SQORQ9Y6N5 450 aa15.06■□□□□ 0
NCKIPSD-204ENST00000416649 TPP1O14773 563 aa15.05■□□□□ 0
NCKIPSD-204ENST00000416649 KDM1AO60341 852 aa15.05■□□□□ 0
NCKIPSD-204ENST00000416649 C1QAP02745 245 aa15.05■□□□□ 0
NCKIPSD-204ENST00000416649 ME2P23368 584 aa15.05■□□□□ 0
NCKIPSD-204ENST00000416649 NPTX2P47972 431 aa15.05■□□□□ 0
NCKIPSD-204ENST00000416649 BAATQ14032 418 aaPredicted RBP15.05■□□□□ 0
NCKIPSD-204ENST00000416649 PCLAFQ15004 111 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms