RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 SPEF1Q9Y4P9 236 aa5.71□□□□□ -1.5
CSTF1-202ENST00000415828 KNTC1P50748 2209 aa5.71□□□□□ -1.5
CSTF1-202ENST00000415828 MYH6P13533 1939 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 KIAA1549LQ6ZVL6 1849 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 CAPN8A6NHC0 703 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 CCDC154A6NI56 674 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 HAS3O00219 553 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 LEFTY2O00292 366 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 ADH4P08319 380 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 NBPF7P0C2Y1 421 aaPredicted RBP5.7□□□□□ -1.5
CSTF1-202ENST00000415828 GHRP10912 638 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 AKR1B1P15121 316 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 MGAT1P26572 445 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 PCSK1P29120 753 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 RNASE9P60153 205 aaKnown RBP5.7□□□□□ -1.5
CSTF1-202ENST00000415828 SLC25A3Q00325 362 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 EXOSC10Q01780 885 aaKnown RBP5.7□□□□□ -1.5
CSTF1-202ENST00000415828 LMOD3Q0VAK6 560 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 IL10RAQ13651 578 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 PPP2R5BQ15173 497 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 RASGRP2Q7LDG7 609 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 CHST3Q7LGC8 479 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 LONP2Q86WA8 852 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 SYT12Q8IV01 421 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 ZNF276Q8N554 614 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 AMER2Q8N7J2 671 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 MRPL43Q8N983 215 aaKnown RBP5.7□□□□□ -1.5
CSTF1-202ENST00000415828 SLC22A17Q8WUG5 538 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 CYFIP2Q96F07 1278 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 TMX3Q96JJ7 454 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 CEP89Q96ST8 783 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 IKZF4Q9H2S9 585 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 TMEM9BQ9NQ34 198 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 AASDHPPTQ9NRN7 309 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 VPS45Q9NRW7 570 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 TDP1Q9NUW8 608 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 HMG20BQ9P0W2 317 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 NDRG2Q9UN36 371 aaKnown RBP5.7□□□□□ -1.5
CSTF1-202ENST00000415828 HIVEP3Q5T1R4 2406 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 PDS5AQ29RF7 1337 aaKnown RBP5.7□□□□□ -1.5
CSTF1-202ENST00000415828 RAD50Q92878 1312 aa5.7□□□□□ -1.5
CSTF1-202ENST00000415828 TRIM24O15164 1050 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 PJA2O43164 708 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 HTRA2O43464 458 aaPredicted RBP5.69□□□□□ -1.5
CSTF1-202ENST00000415828 CHRNA1P02708 482 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 AMY1AP04745 511 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 EEF2P13639 858 aaKnown RBP5.69□□□□□ -1.5
CSTF1-202ENST00000415828 DDCP20711 480 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 MAKP20794 623 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 CA8P35219 290 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 EIF2S3P41091 472 aaKnown RBP5.69□□□□□ -1.5
CSTF1-202ENST00000415828 RECQLP46063 649 aaPredicted RBP5.69□□□□□ -1.5
CSTF1-202ENST00000415828 CHN2P52757 468 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 KRT85P78386 507 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 ATP8B2P98198 1209 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 ICA1Q05084 483 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 GABPAQ06546 454 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 DPTQ07507 201 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 C3orf36Q3SXR2 165 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 RABL6Q3YEC7 729 aaPredicted RBP5.69□□□□□ -1.5
CSTF1-202ENST00000415828 ZNF529Q6P280 563 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 PARM1Q6UWI2 310 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 MED25Q71SY5 747 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 CCDC146Q8IYE0 955 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 MIER2Q8N344 545 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 SLC25A43Q8WUT9 341 aaPredicted RBP5.69□□□□□ -1.5
CSTF1-202ENST00000415828 LARP4BQ92615 738 aaKnown RBP5.69□□□□□ -1.5
CSTF1-202ENST00000415828 KAT5Q92993 513 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 CLIP3Q96DZ5 547 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 MYOCQ99972 504 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 SLC13A1Q9BZW2 595 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 CWH43Q9H720 699 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 NRDE2Q9H7Z3 1164 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 ACAD9Q9H845 621 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 SLC38A10Q9HBR0 1119 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 RNF146Q9NTX7 359 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 TYW1Q9NV66 732 aaKnown RBP5.69□□□□□ -1.5
CSTF1-202ENST00000415828 DDX56Q9NY93 547 aaKnown RBP5.69□□□□□ -1.5
CSTF1-202ENST00000415828 CYP39A1Q9NYL5 469 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 DKK4Q9UBT3 224 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 FBXO40Q9UH90 709 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 LIMCH1Q9UPQ0 1083 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 LZTS1Q9Y250 596 aa5.69□□□□□ -1.5
CSTF1-202ENST00000415828 RTTNQ86VV8 2226 aa5.68□□□□□ -1.5
CSTF1-202ENST00000415828 PCDH15Q96QU1 1955 aa5.68□□□□□ -1.5
CSTF1-202ENST00000415828 H0Y626 953 aa5.68□□□□□ -1.5
CSTF1-202ENST00000415828 EYA2O00167 538 aa5.68□□□□□ -1.5
CSTF1-202ENST00000415828 TEX33O43247 280 aa5.68□□□□□ -1.5
CSTF1-202ENST00000415828 TRIM16O95361 564 aa5.68□□□□□ -1.5
CSTF1-202ENST00000415828 POMCP01189 267 aa5.68□□□□□ -1.5
CSTF1-202ENST00000415828 MYBP10242 640 aa5.68□□□□□ -1.5
CSTF1-202ENST00000415828 TXNP10599 105 aaKnown RBP5.68□□□□□ -1.5
CSTF1-202ENST00000415828 LAMP2P13473 410 aa5.68□□□□□ -1.5
CSTF1-202ENST00000415828 ELAVL4P26378 380 aaKnown RBP5.68□□□□□ -1.5
CSTF1-202ENST00000415828 ADSSP30520 456 aa5.68□□□□□ -1.5
CSTF1-202ENST00000415828 WASP42768 502 aa5.68□□□□□ -1.5
CSTF1-202ENST00000415828 RFX5P48382 616 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-202ENST00000415828 ALDH5A1P51649 535 aaPredicted RBP5.68□□□□□ -1.5
CSTF1-202ENST00000415828 CCR3P51677 355 aa5.68□□□□□ -1.5
CSTF1-202ENST00000415828 NEK2P51955 445 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms