RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 CLEC14AQ86T13 490 aa10.14□□□□□ -0.79
SS18-203ENST00000415083 PDSS2Q86YH6 399 aa10.14□□□□□ -0.79
SS18-203ENST00000415083 HPS6Q86YV9 775 aa10.14□□□□□ -0.79
SS18-203ENST00000415083 ZNF781Q8N8C0 355 aa10.14□□□□□ -0.79
SS18-203ENST00000415083 ZSCAN18Q8TBC5 510 aaPredicted RBP10.14□□□□□ -0.79
SS18-203ENST00000415083 DPF3Q92784 378 aa10.14□□□□□ -0.79
SS18-203ENST00000415083 ISL2Q96A47 359 aa10.14□□□□□ -0.79
SS18-203ENST00000415083 SPATA13Q96N96 652 aa10.14□□□□□ -0.79
SS18-203ENST00000415083 IQCGQ9H095 443 aaKnown RBP10.14□□□□□ -0.79
SS18-203ENST00000415083 GOLGA2P5Q9HBQ8 144 aa10.14□□□□□ -0.79
SS18-203ENST00000415083 SF3B1O75533 1304 aaKnown RBP eCLIP10.13□□□□□ -0.794e-6■■■■■ 96
SS18-203ENST00000415083 ZCWPW2A0A1B0GU75 182 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 ADORA2BP29275 332 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 NUMBP49757 651 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 TMEM62Q0P6H9 643 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 TRMT5Q32P41 509 aaKnown RBP10.13□□□□□ -0.79
SS18-203ENST00000415083 SYPL2Q5VXT5 272 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 ARHGAP17Q68EM7 881 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 OSTM1Q86WC4 334 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 CDKL3Q8IVW4 592 aaPredicted RBP10.13□□□□□ -0.79
SS18-203ENST00000415083 MAP7D3Q8IWC1 876 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 SLC7A14Q8TBB6 771 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 OTUD5Q96G74 571 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 SNX27Q96L92 541 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 ADAMTS10Q9H324 1103 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 GPAMQ9HCL2 828 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 COPG2Q9UBF2 871 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.13□□□□□ -0.79
SS18-203ENST00000415083 RNF103O00237 685 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 AHCYL1O43865 530 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 JUNP05412 331 aaKnown RBP10.13□□□□□ -0.79
SS18-203ENST00000415083 PIM1P11309 404 aaPredicted RBP10.13□□□□□ -0.79
SS18-203ENST00000415083 PEX2P28328 305 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 CD68P34810 354 aaPredicted RBP10.13□□□□□ -0.79
SS18-203ENST00000415083 GJA5P36382 358 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 GRM5P41594 1212 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 DPP6P42658 865 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 AQP4P55087 323 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 SESTD1Q86VW0 696 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 NT5C3BQ969T7 300 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 OR52B2Q96RD2 323 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 TSC22D3Q99576 134 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 ERAP1Q9NZ08 941 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 MORF4L1Q9UBU8 362 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 SOX13Q9UN79 622 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 AKT3Q9Y243 479 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 CLDN5O00501 218 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 ARSAP15289 507 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 DLG1Q12959 904 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 DPYSQ14117 519 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 LRRC36Q1X8D7 754 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 WDR75Q8IWA0 830 aaKnown RBP10.13□□□□□ -0.79
SS18-203ENST00000415083 DCLK2Q8N568 766 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 NPWQ8N729 165 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 AFG1LQ8WV93 481 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 RILPQ96NA2 401 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 RNF39Q9H2S5 420 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 NXF3Q9H4D5 531 aaKnown RBP10.13□□□□□ -0.79
SS18-203ENST00000415083 CDH22Q9UJ99 828 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 KIAA1257Q9ULG3 409 aa10.13□□□□□ -0.79
SS18-203ENST00000415083 MAP3K7O43318 606 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 SLC26A2P50443 739 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 ITGA9Q13797 1035 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 PPM1LQ5SGD2 360 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 C1orf146Q5VVC0 180 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 C9orf57Q5W0N0 161 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 CWF19L1Q69YN2 538 aaKnown RBP10.12□□□□□ -0.79
SS18-203ENST00000415083 OR52K1Q8NGK4 314 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 PGBD4Q96DM1 585 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 ATXN7L3BQ96GX2 97 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 MLPHQ9BV36 600 aaPredicted RBP10.12□□□□□ -0.79
SS18-203ENST00000415083 SNX15Q9NRS6 342 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 DNAJC28Q9NX36 388 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 ZDHHC7Q9NXF8 308 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 CACNG4Q9UBN1 327 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 DCLK1O15075 740 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 GPR32O75388 356 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 NR2C2P49116 596 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 TNFAIP2Q03169 654 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 KIZQ2M2Z5 673 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 ZNF484Q5JVG2 852 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 KCTD11Q693B1 232 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 EPGNQ6UW88 154 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 ARMCX2Q7L311 632 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 MFSD6LQ8IWD5 586 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 DEFB106AQ8N104 65 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 ACTRT2Q8TDY3 377 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 TMEM40Q8WWA1 233 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 APBB2Q92870 758 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 PIGVQ9NUD9 493 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 POMPQ9Y244 141 aa10.12□□□□□ -0.79
SS18-203ENST00000415083 NYNRINQ9P2P1 1898 aaKnown RBP10.12□□□□□ -0.79
SS18-203ENST00000415083 PIRO00625 290 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 CHRNGP07510 517 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 MLNP12872 115 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 AKAP5P24588 427 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 SERPINB9P50453 376 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 POLE2P56282 527 aa10.11□□□□□ -0.79
SS18-203ENST00000415083 ABCE1P61221 599 aaKnown RBP10.11□□□□□ -0.79
SS18-203ENST00000415083 TCHHL1Q5QJ38 904 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms