RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 CATSPER4Q7RTX7 472 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 CCDC91Q7Z6B0 441 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 IRF2BP1Q8IU81 584 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 LILRA3Q8N6C8 439 aaPredicted RBP2.76□□□□□ -1.97
MCF2-204ENST00000414978 FAM71DQ8N9W8 422 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 ZNF540Q8NDQ6 660 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 BCL7CQ8WUZ0 217 aaPredicted RBP2.76□□□□□ -1.97
MCF2-204ENST00000414978 CPT1BQ92523 772 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 VPS33AQ96AX1 596 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 SUCLG2Q96I99 432 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 GUCD1Q96NT3 240 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 NOX5Q96PH1 765 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 GPR20Q99678 358 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 NCAPGQ9BPX3 1015 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 HERC2P3Q9BVR0 1158 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 BTBD2Q9BX70 525 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 NUF2Q9BZD4 464 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 UNKLQ9H9P5 680 aaKnown RBP2.76□□□□□ -1.97
MCF2-204ENST00000414978 SCPEP1Q9HB40 452 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 CCDC177Q9NQR7 707 aaPredicted RBP2.76□□□□□ -1.97
MCF2-204ENST00000414978 TPSG1Q9NRR2 321 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 Q9UFV3 132 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 SLC5A6Q9Y289 635 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 DOCK1Q14185 1865 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 ADGRA2Q96PE1 1338 aa2.76□□□□□ -1.97
MCF2-204ENST00000414978 C2orf78A6NCI8 922 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 TMEM110-MUSTN1A8MSY1 372 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 MED26O95402 600 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 VSIG8P0DPA2 414 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 FOSL1P15407 271 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 EDN2P20800 178 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 FUT4P22083 530 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ACVR2AP27037 513 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ARL3P36405 182 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 PBX3P40426 434 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 EIF2DP41214 584 aaKnown RBP2.75□□□□□ -1.97
MCF2-204ENST00000414978 GMPSP49915 693 aaPredicted RBP2.75□□□□□ -1.97
MCF2-204ENST00000414978 IL1RL1Q01638 556 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 SF3A3Q12874 501 aaKnown RBP eCLIP2.75□□□□□ -1.97
MCF2-204ENST00000414978 NAA25Q14CX7 972 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 AP5B1Q2VPB7 878 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 MCTP2Q6DN12 878 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 FCRL6Q6DN72 434 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 LAYNQ6UX15 382 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 MCM10Q7L590 875 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 BMP8AQ7Z5Y6 402 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 VSIG1Q86XK7 387 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 LURAP1LQ8IV03 231 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ANKS4BQ8N8V4 417 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 TBC1D5Q92609 795 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ZNF622Q969S3 477 aaKnown RBP eCLIP2.75□□□□□ -1.97
MCF2-204ENST00000414978 CDCA5Q96FF9 252 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 WDFY2Q96P53 400 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 STN1Q9H668 368 aaKnown RBP2.75□□□□□ -1.97
MCF2-204ENST00000414978 ADAMTS8Q9UP79 889 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 A0A1W2PQ09 198 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 URADA6NGE7 173 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 E9PLN8 166 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 FMO6PO60774 539 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 MT-ND3P03897 115 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 C8BP07358 591 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ALDH3A2P51648 485 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 MC2RQ01718 297 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ZNF569Q5MCW4 686 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 PLAG1Q6DJT9 500 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 RGS7BPQ6MZT1 257 aaPredicted RBP2.75□□□□□ -1.97
MCF2-204ENST00000414978 MFSD5Q6N075 450 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ARMC8Q8IUR7 673 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ELOA2Q8IYF1 753 aaPredicted RBP2.75□□□□□ -1.97
MCF2-204ENST00000414978 SPARTQ8N0X7 666 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ANKRD44Q8N8A2 993 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 GPR150Q8NGU9 434 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 METTL6Q8TCB7 284 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 BPIFB1Q8TDL5 484 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 VKORC1Q9BQB6 163 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 GORASP1Q9BQQ3 440 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 MAK16Q9BXY0 300 aaKnown RBP2.75□□□□□ -1.97
MCF2-204ENST00000414978 PITHD1Q9GZP4 211 aaPredicted RBP2.75□□□□□ -1.97
MCF2-204ENST00000414978 NYXQ9GZU5 481 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 PDCL3Q9H2J4 239 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 C12orf65Q9H3J6 166 aaKnown RBP2.75□□□□□ -1.97
MCF2-204ENST00000414978 NDST4Q9H3R1 872 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 BCO1Q9HAY6 547 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 CAPN11Q9UMQ6 739 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 MED16Q9Y2X0 877 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 PCDHGA5Q9Y5G8 931 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 PCDHGA1Q9Y5H4 931 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 COL4A6Q14031 1691 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 BTBD18B2RXH4 712 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 AGPSO00116 658 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 HNRNPDLO14979 420 aaKnown RBP2.75□□□□□ -1.97
MCF2-204ENST00000414978 FYB1O15117 783 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 SGTAO43765 313 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ERN1O75460 977 aaKnown RBP2.75□□□□□ -1.97
MCF2-204ENST00000414978 RECQL4O94761 1208 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 ICAM3P32942 547 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 GUCY1A2P33402 732 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 GATA4P43694 442 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 LIMK1P53667 647 aa2.75□□□□□ -1.97
MCF2-204ENST00000414978 RAD23AP54725 363 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms