RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 FAM204AQ9H8W3 233 aa11.31□□□□□ -0.6
A1CF-208ENST00000414883 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.31□□□□□ -0.6
A1CF-208ENST00000414883 ARHGEF38Q9NXL2 777 aa11.31□□□□□ -0.6
A1CF-208ENST00000414883 STIM2Q9P246 746 aa11.31□□□□□ -0.6
A1CF-208ENST00000414883 USP36Q9P275 1121 aaKnown RBP11.31□□□□□ -0.6
A1CF-208ENST00000414883 USP18Q9UMW8 372 aa11.31□□□□□ -0.6
A1CF-208ENST00000414883 CEP83Q9Y592 693 aa11.31□□□□□ -0.6
A1CF-208ENST00000414883 ADAMTS9Q9P2N4 1935 aa11.31□□□□□ -0.6
A1CF-208ENST00000414883 SYNJ2BP-COX16A0A087WUM0 186 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 RHOBTB1O94844 696 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 LUC7L3O95232 432 aaKnown RBP11.3□□□□□ -0.6
A1CF-208ENST00000414883 APOEP02649 317 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 DLDP09622 509 aaKnown RBP11.3□□□□□ -0.6
A1CF-208ENST00000414883 HLA-EP13747 358 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 CCR1P32246 355 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 GGCXP38435 758 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 STAT1P42224 750 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 ATXN1P54253 815 aaKnown RBP11.3□□□□□ -0.6
A1CF-208ENST00000414883 LMNB2Q03252 620 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 ELF2Q15723 593 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 C5orf22Q49AR2 442 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 RAB6CQ53S08 254 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 PEAR1Q5VY43 1037 aaPredicted RBP11.3□□□□□ -0.6
A1CF-208ENST00000414883 TCEAL6Q6IPX3 200 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 SDE2Q6IQ49 451 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 CXorf57Q6NSI4 855 aaKnown RBP11.3□□□□□ -0.6
A1CF-208ENST00000414883 FBXL22Q6P050 247 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 ARCQ7LC44 396 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 IRF2BP2Q7Z5L9 587 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 METTL3Q86U44 580 aaKnown RBP11.3□□□□□ -0.6
A1CF-208ENST00000414883 C11orf74Q86VG3 221 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 ERICH1Q86X53 443 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 CIR1Q86X95 450 aaPredicted RBP11.3□□□□□ -0.6
A1CF-208ENST00000414883 MFN1Q8IWA4 741 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 TMEFF1Q8IYR6 380 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 AHI1Q8N157 1196 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 ZNF366Q8N895 744 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 OR52K2Q8NGK3 314 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 SLC30A5Q8TAD4 765 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 TCEAL3Q969E4 200 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 IGSF8Q969P0 613 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 ALG14Q96F25 216 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 NAP1L5Q96NT1 182 aaPredicted RBP11.3□□□□□ -0.6
A1CF-208ENST00000414883 TBCBQ99426 244 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 DDX50Q9BQ39 737 aaKnown RBP11.3□□□□□ -0.6
A1CF-208ENST00000414883 RAB6CQ9H0N0 254 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 SYNCQ9H7C4 482 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 TMPRSS4Q9NRS4 437 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 TMEM74BQ9NUR3 256 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.3□□□□□ -0.6
A1CF-208ENST00000414883 COX16Q9P0S2 106 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 BCCIPQ9P287 314 aaKnown RBP eCLIP11.3□□□□□ -0.6
A1CF-208ENST00000414883 HS3ST4Q9Y661 456 aa11.3□□□□□ -0.6
A1CF-208ENST00000414883 PCNX2A6NKB5 2137 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 A0A1B0GTH6 734 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 TCRBV5S1A1TA0A578 114 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 PRR5-ARHGAP8B1AHC4 643 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 PATE3B3GLJ2 98 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 M0QYT0 321 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 TM4SF5O14894 197 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 PAGE1O75459 146 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 ENDOD1O94919 500 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 IGLV3-19P01714 112 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 TPM2P07951 284 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 SLC2A3P11169 496 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 CDK11BP21127 795 aaKnown RBP11.29□□□□□ -0.6
A1CF-208ENST00000414883 GBP1P32455 592 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 CSKP41240 450 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 CTSOP43234 321 aaPredicted RBP11.29□□□□□ -0.6
A1CF-208ENST00000414883 ZNF165P49910 485 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 SNX16P57768 344 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 RNASE9P60153 205 aaKnown RBP11.29□□□□□ -0.6
A1CF-208ENST00000414883 ARHGAP8P85298 464 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 CENPCQ03188 943 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 NME3Q13232 169 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 AUHQ13825 339 aaKnown RBP11.29□□□□□ -0.6
A1CF-208ENST00000414883 ARID5BQ14865 1188 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 CLEC16AQ2KHT3 1053 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 SLC25A52Q3SY17 297 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 SPDYCQ5MJ68 293 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 FAM102AQ5T9C2 384 aaPredicted RBP11.29□□□□□ -0.6
A1CF-208ENST00000414883 E4F1Q66K89 784 aaPredicted RBP11.29□□□□□ -0.6
A1CF-208ENST00000414883 CHSY1Q86X52 802 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 SLC41A1Q8IVJ1 513 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 APCDD1Q8J025 514 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 ATP6V0D2Q8N8Y2 350 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 NEK11Q8NG66 645 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 UCMAQ8WVF2 138 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 TTYH3Q9C0H2 523 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 NAT10Q9H0A0 1025 aaKnown RBP11.29□□□□□ -0.6
A1CF-208ENST00000414883 MTG2Q9H4K7 406 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 RRN3Q9NYV6 651 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 ZNF212Q9UDV6 495 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 OR51B4Q9Y5P0 310 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 SNX10Q9Y5X0 201 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 TPRP12270 2363 aaKnown RBP11.29□□□□□ -0.6
A1CF-208ENST00000414883 FREM2Q5SZK8 3169 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 AKAP13Q12802 2813 aa11.29□□□□□ -0.6
A1CF-208ENST00000414883 CABIN1Q9Y6J0 2220 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms