RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 CAVIN3Q969G5 261 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 RNFT2Q96EX2 444 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 HS6ST2Q96MM7 605 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 TIGD1Q96MW7 591 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 MMS19Q96T76 1030 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 CD180Q99467 661 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 HTATIP2Q9BUP3 242 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 ADGRE3Q9BY15 652 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 CIPCQ9C0C6 399 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 USP44Q9H0E7 712 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 INTS2Q9H0H0 1204 aaKnown RBP5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 MTMR4Q9NYA4 1195 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 TFCP2L1Q9NZI6 479 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 KLQ9UEF7 1012 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 FZD4Q9ULV1 537 aa5.24□□□□□ -1.57
HMGB3P31-201ENST00000413333 PI4KAP2A4QPH2 592 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 NPIPB13A6NJU9 1138 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 NPIPB5A8MRT5 1133 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 NPIPB4C9JG80 1138 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 H3BNC9 293 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 K7ENM7 598 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 TIMM44O43615 452 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 ORC4O43929 436 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 F9P00740 461 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 HKR1P10072 659 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 ZNF20P17024 532 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 TGM1P22735 817 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 AVPR2P30518 371 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 GRIA3P42263 894 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 CCT8P50990 548 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 CLNS1AP54105 237 aaKnown RBP5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 SLC37A1P57057 533 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 WDR5P61964 334 aaKnown RBP5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 ARHGAP8P85298 464 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 CFHR3Q02985 330 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 ERV3-1Q14264 604 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 CDSNQ15517 529 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 SH2D4BQ5SQS7 431 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 UBAP2Q5T6F2 1119 aaKnown RBP5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 TMEM88Q6PEY1 159 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 TMTC3Q6ZXV5 915 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 DIS3L2Q8IYB7 885 aaKnown RBP5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 MAFAQ8NHW3 353 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 CXorf38Q8TB03 319 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 ACTRT2Q8TDY3 377 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 CUL5Q93034 780 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 ELP4Q96EB1 424 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 GPR78Q96P69 363 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 NPAS1Q99742 590 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 TRIM31Q9BZY9 425 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 CNOT11Q9UKZ1 510 aaKnown RBP5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 HEMK1Q9Y5R4 338 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 KAT6AQ92794 2004 aa5.23□□□□□ -1.57
HMGB3P31-201ENST00000413333 FAM90A7PA6NKC0 464 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 FAM90A22PA8MWA6 464 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 FAM90A12PA8MX19 464 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 FAM90A23PA8MXZ1 464 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 CLIC1O00299 241 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 TMEM63AO94886 807 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 ALDOCP09972 364 aaKnown RBP5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 UBL4AP11441 157 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 CYP4B1P13584 511 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 APEHP13798 732 aaKnown RBP5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 ARSAP15289 507 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 PRPH2P23942 346 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 NDUFS1P28331 727 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 GPD2P43304 727 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 BLOC1S1P78537 153 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 B4GALNT1Q00973 533 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 SETQ01105 290 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 MPP3Q13368 585 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 BYSLQ13895 437 aaKnown RBP5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 TBCEQ15813 527 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 ERCC6LQ2NKX8 1250 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 SPATA1Q5VX52 437 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 FAM205BPQ63HN1 556 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 MTFR2Q6P444 385 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 LAS2Q8IYD9 372 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 CNTROBQ8N137 903 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 ZNF366Q8N895 744 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 BEND2Q8NDZ0 799 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 RFWD2Q8NHY2 731 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 ZCCHC10Q8TBK6 192 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 EYA3Q99504 573 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 MACROD1Q9BQ69 325 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 THAP7Q9BT49 309 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 SFXN1Q9H9B4 322 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 CYP4F11Q9HBI6 524 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 CD207Q9UJ71 328 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 TSC22D4Q9Y3Q8 395 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 RPS6KL1Q9Y6S9 549 aa5.22□□□□□ -1.57
HMGB3P31-201ENST00000413333 TDRD9Q8NDG6 1382 aaKnown RBP5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 CCDC151A5D8V7 595 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 PRYO14603 147 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 DOK2O60496 412 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 METTL18O95568 372 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 ELFN1P0C7U0 828 aa5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 HSPA1AP0DMV8 641 aaKnown RBP5.21□□□□□ -1.58
HMGB3P31-201ENST00000413333 HSPA1BP0DMV9 641 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms